| AN10838 | |
|---|---|
| Uniprot | C8V1F1 |
| Length | 1233 |
Bioinformatic-based prediction
| Signal peptide | |
|---|---|
| SignalP | Yes |
| Phobius | Yes |
| Uniprot annotation with experimental evidence | NA |
| Transmembrane domain | |
| TMHMM | Yes |
| Phobius | Yes |
| Uniprot annotation with experimental evidence | NA |
| GPI anchor | |
| bigPI | No |
| PredGPI | No |
| Uniprot annotation with experimental evidence | NA |
| Subcellular localization | |
| WolF Psort1 | E |
| Protcomp1 | P |
| TargetP1 | S |
| Uniprot annotation with experimental evidence | NA |
1Following letter codes were used for different subcellular localization predictions from WoLF PSORT, Protcomp and TargetP:
P - Plasma membrane, E - Extracellular, S - Secretory pathway, M - Mitochondrial, ER - Endoplasmic reticulum, C- Cytoplasmic/Cytosol, L- Lysosomal,
G - Golgi apparatus, N - Nuclear, V - Vacuolar, R - Peroxisomal, CN - Cytosol and Nucleus, CK - Cytoskeleton, CM - Cytosol and Mitochondria, _ - Other
| Endoplasmic reticulum (ER) retention signal | |
|---|---|
| PS SCAN | No |
| Abundance of Antigenic Regions (AAR) | |
|---|---|
| Kolaskar & Tongaonkar | 21.632 |
| BepiPred | 51.375 |
| Annotation | |
|---|---|
| Gene Ontology (GO) | GO:0043169, GO:0005975, GO:0016998, GO:0004568, GO:0006032, GO:0008061 cation binding (MF), carbohydrate metabolic process (BP), cell wall macromolecule catabolic process (BP), chitinase activity (MF), chitin catabolic process (BP), chitin binding (MF) |
| CAZy | CBM18, GH18, CBM50 |
| Pfam | PF00704.27, PF01476.19 Glycosyl hydrolases family 18, LysM domain |
| TIGRFAM | NA NA |
| SFLD | NA NA |
| SMARTS | NA NA |
| CDD | cd00035,cd00118,cd00118 ChtBD1,LysM,LysM |
| Prosite Profiles | PS51782,PS51782 LysM domain profile.,LysM domain profile. |
| Prosite Patterns | PS01095 Chitinases family 18 active site. |
| SUPERFAMILY | SSF57016,SSF54106,SSF54556,SSF51445 ,,, |
| PRINTS | NA NA |
| COILS | NA NA |
| MobiDB lite | mobidb-lite consensus disorder prediction |