| AN3817 | |
|---|---|
| Uniprot | Q5B6L3 |
| Length | 1116 |
Bioinformatic-based prediction
| Signal peptide | |
|---|---|
| SignalP | No |
| Phobius | No |
| Uniprot annotation with experimental evidence | NA |
| Transmembrane domain | |
| TMHMM | Yes |
| Phobius | Yes |
| Uniprot annotation with experimental evidence | NA |
| GPI anchor | |
| bigPI | No |
| PredGPI | No |
| Uniprot annotation with experimental evidence | NA |
| Subcellular localization | |
| WolF Psort1 | P |
| Protcomp1 | P |
| TargetP1 | M |
| Uniprot annotation with experimental evidence | NA |
1Following letter codes were used for different subcellular localization predictions from WoLF PSORT, Protcomp and TargetP:
P - Plasma membrane, E - Extracellular, S - Secretory pathway, M - Mitochondrial, ER - Endoplasmic reticulum, C- Cytoplasmic/Cytosol, L- Lysosomal,
G - Golgi apparatus, N - Nuclear, V - Vacuolar, R - Peroxisomal, CN - Cytosol and Nucleus, CK - Cytoskeleton, CM - Cytosol and Mitochondria, _ - Other
| Endoplasmic reticulum (ER) retention signal | |
|---|---|
| PS SCAN | No |
| Abundance of Antigenic Regions (AAR) | |
|---|---|
| Kolaskar & Tongaonkar | 29.368 |
| BepiPred | 53.1428571429 |
| Annotation | |
|---|---|
| Gene Ontology (GO) | GO:0016021, GO:0005886 integral component of membrane (CC), plasma membrane (CC) |
| CAZy | NA |
| Pfam | PF00368.17, PF13323.5, PF12349.7, PF02460.17 Hydroxymethylglutaryl-coenzyme A reductase, N-terminal domain with HPIH motif, Sterol-sensing domain of SREBP cleavage-activation, Patched family |
| TIGRFAM | TIGR00533 HMG_CoA_R_NADP: hydroxymethylglutaryl-CoA reductase (NADPH) |
| SFLD | NA NA |
| SMARTS | NA NA |
| CDD | cd00643 HMG-CoA_reductase_classI |
| Prosite Profiles | PS50065,PS50156 Hydroxymethylglutaryl-coenzyme A reductases family profile.,Sterol-sensing domain (SSD) profile. |
| Prosite Patterns | PS00066,PS00318,PS01192 Hydroxymethylglutaryl-coenzyme A reductases signature 1.,Hydroxymethylglutaryl-coenzyme A reductases signature 2.,Hydroxymethylglutaryl-coenzyme A reductases signature 3. |
| SUPERFAMILY | SSF56542,SSF56542,SSF55035 ,, |
| PRINTS | PR00071,PR00071,PR00071,PR00071,PR00071,PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature,Hydroxymethylglutaryl-coenzyme A reductase signature,Hydroxymethylglutaryl-coenzyme A reductase signature,Hydroxymethylglutaryl-coenzyme A reductas |
| COILS | NA NA |
| MobiDB lite | mobidb-lite consensus disorder prediction |