Transcript Information: R_Transcript_100024.p1


Annotated TAIR IDAT2G36980.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15531161-15533038 | Forward length=625
E-Value1.4E-237
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0476313474479
Replicate 26.1043557120867
Replicate 36.8793397253621
Condition 2: 8 Hour
Replicate 17.6665008461023
Replicate 27.5012542917715
Replicate 37.8869618031074
Condition 3: 24 Hour
Replicate 19.1317795522337
Replicate 25.7075909589034
Replicate 38.2515947381913


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100024.p1 GENE.R_Transcript_100024~~R_Transcript_100024.p1 ORF type:complete len:626 (+),score=85.70,PPR_2|PF13041.2|2.5,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|0.07,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|1.7e-09,PPR_2|PF13041.2|1.6e+02,PPR_2|PF13041.2|3.6e+03,PPR_2|PF13041.2|16,PPR|PF01535.16|0.62,PPR|PF01535.16|0.0054,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.024,PPR|PF01535.16|0.036,PPR|PF01535.16|3.8e-06,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|0.0029,PPR|PF01535.16|0.14,PPR|PF01535.16|86,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|1.2,PPR|PF01535.16|2.9e+02,PPR|PF01535.16|0.27,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|2.4e+02,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|29,PPR_3|PF13812.2|0.033,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|0.44,PPR_3|PF13812.2|45,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|59,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|7.7,PPR_1|PF12854.3|0.065,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|8.8e+02,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|2.8,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|79,PPR_1|PF12854.3|5,PPR_1|PF12854.3|0.53,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|0.00079,PPR_1|PF12854.3|15,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|2.6e+02 R_Transcript_100024:1119-2996(+)
ATGTGTTCAAGTTTGTTTAAGGCCACATCTCAAATTGTTGCGTCTGCAAGATCAGGTAGAATCACGGATGCCCGCAAGCTGTTCGACGAAATGACTACCAGAGACACAGTTGCTTGGAATGCCATTCTTTCTTCCTATTCTCATTTGGGTATTTACCAACAAGTCTTCTCTTTGTTCAAACAAATGAGAATCTCCAATACTAAGCCTGATCAGTTCACCTTTACGGCCACTCTTAGTGCATGTGCTGGAGCAGGGGATGTGAGATTTGGTTCAATAATTCATGCCTTTGTAGTTGGTTATGGGTGCCAGAATTCCGTGCCTGTGAGAAACTCTCTTATCGACATGTATGGAAAGTGTTTGAGTCCTTGTAGTGCCAGAAAAGTGTTCGAGGAGATGTGTTTAAGGAACGAAGTGTCGTGGTGTTCACTGTTGTTTTCCTATGTTAATGCTGGTCTATTTGATGCTGCTAATGATGTATTCTGGAGTATGCCGGAAAGGGTTGGAATTTCTTGGAACATAATGTTTGCAGGTCATGCTCGATCAGGAGATTGTGAATTGTGCTTGAGCTTATTTAGACAAATGAGAGAAAGTAATGGTTGTTACCCTGATCAATGGACTTTGAGTGCCCTCATGAACTCATGTACAGAAAGCAGCGAGTCTTTTTGTGGTCGTATGATCCATGCTTCTCTGGTTAAAAGTGGGTGGCATTCATCCATCGAAGTGAAAAACTCGATTTTAAGCTTCTATGCTCAATTGGGAAGTCGAGATGATATCCAGAAGGCACTTGAGTCCATTGAATATTCATCAGATCAGATTTCCTCGAATGCTGTCATTGATGCTCATATGAAGATGGGAAATACCCATGAAGCCGAGCTTCTCTTTCAACGAATACCAGAGAAAAATATCATTTCTTGGACATCTATGATTGCTGGGTTCACAAGAAACGGGCAGCAAACACAAGCCATTAGCTTCTTTGTTGATTTGATGAGACATTCTGTTAGACCTGATGAGCTAGCCTTTGGTGCGGTCCTCCTTGCATGTTCTAGTTTAGCTGTAATTGGACATGGTATGGTGATCCATGGTTGCTTGATACGAAATGGTTTCGATGCCTGTGTTTATGTAGGCAACGGATTAGTCAACATGTATGCCAAGTGTGGTGACTTGGTTGCGTCAAGTAGAGCTTTTCGAAATATTATCAGCAAGGATTTGGTATCATGGAACACTATTTTGTTTGCATATGGATTGCATGGAAGGGCTAGGGAAGCATTACAATTATATGAAGAAATGTTAGCCTGTGGGATAAAACCTGATATTGTGACCTTTATTGGCTTGCTCATGACTTGCAGCCATTCTGGCCTTGTAGAGAATGTTCGATCCCTTTTTGAGTCTATGTTGTCAATTCATGGCTTATCCTACAACTTGCAGCATGTGACGTGTATTGTTGATATGCTTGGACGAGCTGGATATTTGACAGAAGCTAGATTGTTAGCAAGTGATTATCAGGGCGTTAAAGCTGTAAAGACAAGGTCATCTGAAGCTATTCTAGGGGCATGTTCTGTAAACTTGGATATAGGAATGGCGACACAAATTGGGGAAGATTTGATGATTTCAGAACCTCAGAAAGATTTGAGCTATGTGTTATTGTCGAATTTGTATTGTGCGAGTGGGAAGTGGAAGGAAGCTGAGATTGTGAGGAAGGCTATGTCTGATCAAGGAGTGAAGAAAATACCTGGATGTAGTTGGATTGAAGTGAGAAATGACTTGACATGTTTTACTTCAGGGGACTACTCACACGCATGTATGGACAAGATATGTAAGACACTACTCATTCTAGAATTTGAAATGAAACATCCTTGCTTTTACAGTTACAGCAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100024.p1 GENE.R_Transcript_100024~~R_Transcript_100024.p1 ORF type:complete len:626 (+),score=85.70,PPR_2|PF13041.2|2.5,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|3.9,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|0.07,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|1.7e-09,PPR_2|PF13041.2|1.6e+02,PPR_2|PF13041.2|3.6e+03,PPR_2|PF13041.2|16,PPR|PF01535.16|0.62,PPR|PF01535.16|0.0054,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.024,PPR|PF01535.16|0.036,PPR|PF01535.16|3.8e-06,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|0.0029,PPR|PF01535.16|0.14,PPR|PF01535.16|86,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|1.2,PPR|PF01535.16|2.9e+02,PPR|PF01535.16|0.27,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|2.4e+02,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|29,PPR_3|PF13812.2|0.033,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|0.44,PPR_3|PF13812.2|45,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|59,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|7.7,PPR_1|PF12854.3|0.065,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|8.8e+02,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|2.8,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|79,PPR_1|PF12854.3|5,PPR_1|PF12854.3|0.53,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|0.00079,PPR_1|PF12854.3|15,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|2.6e+02 R_Transcript_100024:1119-2996(+)
MCSSLFKATSQIVASARSGRITDARKLFDEMTTRDTVAWNAILSSYSHLGIYQQVFSLFKQMRISNTKPDQFTFTATLSACAGAGDVRFGSIIHAFVVGYGCQNSVPVRNSLIDMYGKCLSPCSARKVFEEMCLRNEVSWCSLLFSYVNAGLFDAANDVFWSMPERVGISWNIMFAGHARSGDCELCLSLFRQMRESNGCYPDQWTLSALMNSCTESSESFCGRMIHASLVKSGWHSSIEVKNSILSFYAQLGSRDDIQKALESIEYSSDQISSNAVIDAHMKMGNTHEAELLFQRIPEKNIISWTSMIAGFTRNGQQTQAISFFVDLMRHSVRPDELAFGAVLLACSSLAVIGHGMVIHGCLIRNGFDACVYVGNGLVNMYAKCGDLVASSRAFRNIISKDLVSWNTILFAYGLHGRAREALQLYEEMLACGIKPDIVTFIGLLMTCSHSGLVENVRSLFESMLSIHGLSYNLQHVTCIVDMLGRAGYLTEARLLASDYQGVKAVKTRSSEAILGACSVNLDIGMATQIGEDLMISEPQKDLSYVLLSNLYCASGKWKEAEIVRKAMSDQGVKKIPGCSWIEVRNDLTCFTSGDYSHACMDKICKTLLILEFEMKHPCFYSYSN*

Click here to download the sequence:
Link to NCBI Protein BLAST