Transcript Information: R_Transcript_100050.p1


Annotated TAIR IDAT5G25190.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8707007-8707655 | Reverse length=181
E-Value2E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4040739195937
Replicate 22.2880583786992
Replicate 31.7620567381656
Condition 2: 8 Hour
Replicate 13.6100954729913
Replicate 28.026983225041
Replicate 38.3776664401786
Condition 3: 24 Hour
Replicate 14.5621283593515
Replicate 24.524155669862
Replicate 34.7703971753494


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100050.p1 GENE.R_Transcript_100050~~R_Transcript_100050.p1 ORF type:internal len:156 (+),score=8.65,AP2|PF00847.16|3.1e-11 R_Transcript_100050:1-465(+)
CCCCACTCCAAACACACACTTTCTCTCTTTCTCCTCTGTTTTTCACTCAGCCATTTCATTCATAGAAACACTTTGTTGCTCACTCTTTCATACAAAAAGAAACGTTTCTTACATAAAAACTTGGTACGTTTCTTTCTCATGGCACGACCACAGCAGCGTTACAGAGGCGTTCGCCAAAGGCACTGGGGCTCATGGGTATCAGAAATTCGCCATCCCTTATTGAAAACGCGAATATGGCTGGGAACATTCGAAACGGCTGAAGATGCAGCTAGAGCATATGATGAAGCAGCAAGGCTAATGTGTGGACCTAGAGCTCGGACCAACTTTCCATACAATGGGATTCAATCACCTTCTTCAAAACTTCTTTCTTCAACTCTTGCTTCAAAATTACACAAATGCCATCTTCAAGCCACCCTTCAACTAACCAAAAGAAATGAAGTCAATAATGCTAGTGCTAAGAACAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100050.p1 GENE.R_Transcript_100050~~R_Transcript_100050.p1 ORF type:internal len:156 (+),score=8.65,AP2|PF00847.16|3.1e-11 R_Transcript_100050:1-465(+)
PHSKHTLSLFLLCFSLSHFIHRNTLLLTLSYKKKRFLHKNLVRFFLMARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNGIQSPSSKLLSSTLASKLHKCHLQATLQLTKRNEVNNASAKNN

Click here to download the sequence:
Link to NCBI Protein BLAST