Transcript Information: R_Transcript_100052.p1


Annotated TAIR IDAT1G15360.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)SHN1, WIN1
Annotation TypeOrtholog
Chromosome Positionchr1:5283609-5284506 | Forward length=199
E-Value2.3E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.098134198681284
Replicate 20.22576667114299
Replicate 30.24630900641024
Condition 2: 8 Hour
Replicate 10.9215110464017
Replicate 21.9235167175213
Replicate 32.2445540014457
Condition 3: 24 Hour
Replicate 11.1108616400502
Replicate 20.71145996421217
Replicate 31.4121099797998


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100052.p1 GENE.R_Transcript_100052~~R_Transcript_100052.p1 ORF type:5prime_partial len:186 (+),score=19.71 R_Transcript_100052:1-558(+)
AAAACGCGAATATGGCTGGGAACATTCGAAACGGCTGAAGATGCAGCTAGAGCATATGATGAAGCAGCAAGGCTAATGTGTGGACCTAGAGCTCGGACCAACTTTCCATACAATGGGATTCAATCACCTTCTTCAAAACTTCTTTCTTCAACTCTTGCTTCAAAATTACACAAATGCCATCTTCAAGCCACCCTTCAACTAACCAAAAGAAATGAAGTCAATAATGCTAGTGCTAAGAACAACAACAATAACAATAATAATAATAATGTTACTAGGAGCATAAATGTTGTTGATCATGGAGAAAGGGCGGTCCGAATGGCGGTTGAAACACCGGAGAGTTCACCGGAGATGAGTTGGAGTAGGGAGGAACAAAGCCCTCCATTATTGTTTGAAGATGATCATACACATATTGAACAGATGATCGAGGAGTTGCTTGATTATGGCTATTTTGAACTTTGCAATACTGAAAAACACAATAGCAAGCTAGATGTACCTTTTTTTTATTACCATATGATCATATATACTGTACTATATAATATAATAGTCAATTTTATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100052.p1 GENE.R_Transcript_100052~~R_Transcript_100052.p1 ORF type:5prime_partial len:186 (+),score=19.71 R_Transcript_100052:1-558(+)
KTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNGIQSPSSKLLSSTLASKLHKCHLQATLQLTKRNEVNNASAKNNNNNNNNNNVTRSINVVDHGERAVRMAVETPESSPEMSWSREEQSPPLLFEDDHTHIEQMIEELLDYGYFELCNTEKHNSKLDVPFFYYHMIIYTVLYNIIVNFI*

Click here to download the sequence:
Link to NCBI Protein BLAST