Transcript Information: R_Transcript_100083.p1


Annotated TAIR IDAT5G53130.1
Annotated Gene Namecyclic nucleotide gated channel 1
Annotated Gene Symbol(s)CNGC1, ATCNGC1
Annotation TypeOrtholog
Chromosome Positionchr5:21537830-21540490 | Reverse length=716
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.600584078739
Replicate 22.5022988167369
Replicate 33.5772165561115
Condition 2: 8 Hour
Replicate 12.6833824599721
Replicate 23.3081852586959
Replicate 32.9092307432675
Condition 3: 24 Hour
Replicate 12.1385354677861
Replicate 21.450208803764
Replicate 32.6085346681645


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100083.p1 GENE.R_Transcript_100083~~R_Transcript_100083.p1 ORF type:complete len:730 (+),score=94.58,Ion_trans|PF00520.27|3.1e-37,cNMP_binding|PF00027.25|1.5e-05 R_Transcript_100083:168-2357(+)
ATGTCTGAAGTCAATATACAGCTTACTGAAGCAATGAATTACAGGCCAGCAAGAGTTGCAAGTGTCAGTTTTGAGGACAGGTATTCAGAGGGCTCGATGAGTTCTGAGCACCCACTGTATCCTACAAAGAAGCTGCTTCCTGAGAGAAGAGCGTCATTTGACATGGCCTTGGATGTTATTCGAAGAGGCTTTCAGAGAAGTTCACGAGGGATCAGAAGCTTGAGGGTGTCACTGAGCTTACATTCATTCTATGATCAATCACCGAGCAAGCCAGTTCACCTGAGAAAAATTCTTGATCCCCAGGGACCGCTTCTTCAGAAATGGAACAAGATATTTCTAATCTCATGTGTGTTTGCTCTAGCATGGGATCCGTTGTTCTTCTACATCCCAGTTATAGATGGCAAGAACCAGTGCCTCAAGTTGGATCAGAATTTGGAAATCATAGCTTGTGTTCTACGTACAATCTCAGATTTGTTCTACCTACTTCATATAATTATACAGTTTCGTACAGGCTTTATCTCCCCTTCTTCTCGAGTGCTAGGCCGAGGTGAATTGATCAAGGACCCTGTTGCAATAGCCAAAAAATACGTCTTTCCATACTTCTTCATTGACATTCTAGCTGTGCTCCCCATGCCCCAGCTGGCAGTTTTATGTGTCATTCCAAAGTTGCCAAGTCATTTTACTGCAAAGAGGGTGTTGAAAATTGTGATCTTCACCCAATATGTCCCAAGGATTTTTCGGATTTACCCTTTGTACAAGGAAGTGACACAGACTTCAGGCATAATTACTGAGACACCATGGGCTGGAGCTGCATTTAACCTGTTTCTCTACATGCTAGCGAGCCATGTGGTAGGAGCAGCTTGGTATTTGTTTTCAATTGATCGGCAGAGCAGATGCTGGCGGAAGTCATGCGAGGGACCAGAATGCCATAATATGTCCCTATATTGCAAGTACAAGACCAAGGGAATTAAGTTCAATGAGAGCTACTGCAAACTTATAGACCCTGATGACATAAAAGATTCTACCGTCTTTAACTTTGGCATGTTCTATAATGCTCTTCAATCAGAAGTGGTGCAATCCACTGATGTTTTCAAGAAGCTGTTTTACTGTTTTTGGTGGGGCCTTCAAAATCTCAGCTCTCTTGGTCAAAATCTCAAAACGAGTACTTTTATTGGAGAGAACTTGTTTGCTGCCTTCATCTGTTTGTTTGGACTGGTTCTGTTTTCATTTCTCATCGGGAATATGCAGAAATATCTACAATCTACCACGGTCAGAATAGAGGAGATGAGGGTGAGATGGCGAGACTCAGAGCAGTGGATGTCACATCGTATGCTTCCTGAGGAATTGAGGGAGAGGATTAGGAGGTACGAACAATACAAATGGCAAGAAACAAGAGGTGTTGATGAAGAGTTCGTAATTCGTAACCTTCCTAAGGACCTTAGGAGGGACATTAAACTCCATCTTTGCTTGGATCTCCTTATGAGAGTACCGATGTTTAAGAAAATGGATGAAAAGTTGATAGATGCCATGTGTGATCGCCTGAAACCAGTGCTTTACACTGAGAACAGCTCTATTTTACGAGAAGGGGACCCGGTTAACGAGATGCTGTTTATTATGAGAGGAAACCTACTGACTATGACTACAAATGGTGGAAGAACTGGCTTCTTTAACTCGGTTTTTCTTGATGCTGGTGATTTCTGTGGGGAAGAGCTACTTACATGGGCTCTAGATCCACACACCTCCGCAAATCTGCCCATCTCAACTAGGACTGTACAGACTAAAAGTGAGGTTGAAGCCTTTGCACTTATGGCAGACGATCTTAAGTTTGTGGCTTCTCAGTTTCGTCGACTTCACAGTAAGCAGCTGCGACACACATTTAAGTTCTATTCACAGCAATGGAGGACATGGGCAGCATGTTTTATACAAGTAGCATGGCAAAGGCGCTGTAGGCGGAAGGTTGAGAAATCTCTAAAAGAGGCTGAATATCGGTTAAAGAACGCTCTAGTCAAGGAAGGTGGAGGTTCAGGCTCCCCAAGCTTAGGTGCCACCATTTATGCATCAAGGTTTGCTGCCAATGCATTACGGAAGCTACGACGGAATAGTGCCCGAAATCCCACAATGTCTCAAAGGCTTTCTTCTCTCAACCTGCAAAAGCCTACTGAGCCTGATTTCACTTCTGATGATGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100083.p1 GENE.R_Transcript_100083~~R_Transcript_100083.p1 ORF type:complete len:730 (+),score=94.58,Ion_trans|PF00520.27|3.1e-37,cNMP_binding|PF00027.25|1.5e-05 R_Transcript_100083:168-2357(+)
MSEVNIQLTEAMNYRPARVASVSFEDRYSEGSMSSEHPLYPTKKLLPERRASFDMALDVIRRGFQRSSRGIRSLRVSLSLHSFYDQSPSKPVHLRKILDPQGPLLQKWNKIFLISCVFALAWDPLFFYIPVIDGKNQCLKLDQNLEIIACVLRTISDLFYLLHIIIQFRTGFISPSSRVLGRGELIKDPVAIAKKYVFPYFFIDILAVLPMPQLAVLCVIPKLPSHFTAKRVLKIVIFTQYVPRIFRIYPLYKEVTQTSGIITETPWAGAAFNLFLYMLASHVVGAAWYLFSIDRQSRCWRKSCEGPECHNMSLYCKYKTKGIKFNESYCKLIDPDDIKDSTVFNFGMFYNALQSEVVQSTDVFKKLFYCFWWGLQNLSSLGQNLKTSTFIGENLFAAFICLFGLVLFSFLIGNMQKYLQSTTVRIEEMRVRWRDSEQWMSHRMLPEELRERIRRYEQYKWQETRGVDEEFVIRNLPKDLRRDIKLHLCLDLLMRVPMFKKMDEKLIDAMCDRLKPVLYTENSSILREGDPVNEMLFIMRGNLLTMTTNGGRTGFFNSVFLDAGDFCGEELLTWALDPHTSANLPISTRTVQTKSEVEAFALMADDLKFVASQFRRLHSKQLRHTFKFYSQQWRTWAACFIQVAWQRRCRRKVEKSLKEAEYRLKNALVKEGGGSGSPSLGATIYASRFAANALRKLRRNSARNPTMSQRLSSLNLQKPTEPDFTSDDA*

Click here to download the sequence:
Link to NCBI Protein BLAST