Transcript Information: R_Transcript_100085.p1


Annotated TAIR IDAT2G41720.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)EMB2654
Annotation TypeOrtholog
Chromosome Positionchr2:17403744-17407127 | Reverse length=822
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6640876084074
Replicate 20.68791297660236
Replicate 31.142073811774
Condition 2: 8 Hour
Replicate 11.046404484925
Replicate 21.6882147259015
Replicate 31.8875606485588
Condition 3: 24 Hour
Replicate 11.5370611676668
Replicate 21.0367856743434
Replicate 31.527774258772


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100085.p1 GENE.R_Transcript_100085~~R_Transcript_100085.p1 ORF type:complete len:702 (+),score=107.26,PPR_2|PF13041.2|4.9e-12,PPR_2|PF13041.2|3.3e-10,PPR_2|PF13041.2|6.1e-10,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|8.2e-08,PPR_2|PF13041.2|3.1e-05,PPR_2|PF13041.2|5.3e-15,PPR_2|PF13041.2|1.6e-11,PPR_2|PF13041.2|6.8e-14,PPR_2|PF13041.2|1.1e-16,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|1.6e-09,PPR_2|PF13041.2|0.0062,PPR_2|PF13041.2|0.00033,PPR_2|PF13041.2|2.4,PPR|PF01535.16|3.9e-05,PPR|PF01535.16|0.00018,PPR|PF01535.16|5.2e-07,PPR|PF01535.16|2,PPR|PF01535.16|0.24,PPR|PF01535.16|0.006,PPR|PF01535.16|6.6e-06,PPR|PF01535.16|3.4e-05,PPR|PF01535.16|3.9e-09,PPR|PF01535.16|6.7e+03,PPR|PF01535.16|4.8e-05,PPR|PF01535.16|6.3e-08,PPR|PF01535.16|0.0038,PPR|PF01535.16|9e-05,PPR|PF01535.16|0.13,PPR|PF01535.16|27,PPR|PF01535.16|0.71,PPR|PF01535.16|3.7e+02,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|5.4e-06,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.034,PPR_3|PF13812.2|0.00019,PPR_3|PF13812.2|6.5e-05,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|7e+03,PPR_3|PF13812.2|0.0045,PPR_3|PF13812.2|0.00085,PPR_3|PF13812.2|0.00019,PPR_3|PF13812.2|0.00059,PPR_3|PF13812.2|17,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|7.7e+02,PPR_3|PF13812.2|0.0023,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|2.8e-05,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|29,PPR_1|PF12854.3|0.063,PPR_1|PF12854.3|1.8e-05,PPR_1|PF12854.3|0.0059,PPR_1|PF12854.3|5.2e-09,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.0028,PPR_1|PF12854.3|7.8e-11,PPR_1|PF12854.3|5.4e+02,PPR_1|PF12854.3|0.0053,PPR_1|PF12854.3|3e+02,PPR_1|PF12854.3|7.8e+02,PPR_1|PF12854.3|1.7e+03,TPR_11|PF13414.2|1.9e+02,TPR_11|PF13414.2|1.6,TPR_11|PF13414.2|0.54,TPR_11|PF13414.2|3.4e+02,TPR_11|PF13414.2|7.3e+03,TPR_11|PF13414.2|19,TPR_11|PF13414.2|0.062,TPR_11|PF13414.2|7.6e+03,TPR_7|PF13176.2|2.1,TPR_7|PF13176.2|1.5e+02,TPR_7|PF13176.2|5.3e+03,TPR_7|PF13176.2|9e+03,TPR_7|PF13176.2|3.6,TPR_7|PF13176.2|55,TPR_7|PF13176.2|9.2e+03,TPR_7|PF13176.2|2.2e+02,TPR_7|PF13176.2|7.2e+02,TPR_12|PF13424.2|2.4e+03,TPR_12|PF13424.2|13,TPR_12|PF13424.2|8.9,TPR_12|PF13424.2|2.4e+02,TPR_12|PF13424.2|1.4e+02,TPR_12|PF13424.2|4.3e+03,TPR_12|PF13424.2|4.5,TPR_12|PF13424.2|37,TPR_12|PF13424.2|69,ANAPC3|PF12895.3|18,ANAPC3|PF12895.3|4e+03,ANAPC3|PF12895.3|2.7e+03,ANAPC3|PF12895.3|0.00077,ANAPC3|PF12895.3|3.5e+02,TPR_1|PF00515.24|6.3e+03,TPR_1|PF00515.24|2.9,TPR_1|PF00515.24|6.1e+02,TPR_1|PF00515.24|2.3e+02,TPR_1|PF00515.24|5.3e+02,TPR_1|PF00515.24|6.2e+02,TPR_1|PF00515.24|1.6,TPR_1|PF00515.24|2.4,TPR_1|PF00515.24|1.1e+03,TPR_1|PF00515.24|9.3e+03,TPR_19|PF14559.2|3.7e+02,TPR_19|PF14559.2|5e+03,TPR_19|PF14559.2|77,TPR_19|PF14559.2|1e+03,TPR_19|PF14559.2|1.4e+03,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|1.2,TPR_19|PF14559.2|7.2e+03,ECSIT|PF06239.7|40,ECSIT|PF06239.7|4.3e+02,ECSIT|PF06239.7|4.8e+02,ECSIT|PF06239.7|11,ECSIT|PF06239.7|15,ECSIT|PF06239.7|1.3e+02,Clathrin|PF00637.16|80,Clathrin|PF00637.16|1.4e+03,Clathrin|PF00637.16|6.3e+02,Clathrin|PF00637.16|12,Clathrin|PF00637.16|3,Clathrin|PF00637.16|1.3e+02,TPR_10|PF13374.2|2.9e+03,TPR_10|PF13374.2|7.2e+02,TPR_10|PF13374.2|0.54,TPR_10|PF13374.2|7.7e+02,TPR_10|PF13374.2|26,TPR_10|PF13374.2|1.3e+03,TPR_10|PF13374.2|3.9e+03,TPR_10|PF13374.2|6.8e+02 R_Transcript_100085:640-2745(+)
ATGAAAAATCAGAAGAATTATTGTGCTCGGAACGACATATACAATATGATGATCAGATTACATGCCAGACATAACCGTGTAGATCAGGCACGTGGCTTGTTTTTTGAGATGCAAGAATGGAAATGCAAGCCAGATGCTGAAACGTACAATGCTCTCATCAACGCACATGGACGAGCTGGTCAATGGCATTGGGGAATGAATATCATGGATGATATGCTCCGTGCGGCTATACCACCAAGTCGATCAACATATAACAACTTGATCAATGCTTGTGGATCTAGTGGAAATTGGAGAGAGGCACTCAAAATCTGCAAACACATGACTGATAATGGAGTTGGGCCTGACCTGGTAACACACAACATTATTTTATCCGCCTACAAAACTGGTGCTCAGTATTCTAAAGCTTTGTCCTACTATGAACTTATGAAAGGGACAAATATACGCCCAGACACTACTACTCTTAACATTAGAATATACTGCCTTGTAAAGCTTGGTCAGAATGGAGAAGCTATTGATACTTTTAATTCAATGAGGGACAAGAAATCTGAGTGCCAGCCTGATGTGGTAACATTTACGAGCATCATGCATATGTATTCTATATGCGGAGAGACCGAAAACTGCAAGGCTGTGTTTGACACAATGCTCGCAGAGGGTCTTGCACCCAATATTGTAGCATACAACACTCTACTAGGTGCGTATGCTTCCCGTGGGATGAGCGAAGAAGCTTTGGCAGTTTTCAATGAGATTAAGAAAACCAGTCTCCGTCCAGATGTTGTGTCTTACACATCTCTACTTAATGCATATGGAAGATCACAGCAACCTTATAAGGCTAAGAAAACATTCCACATGATGAAACGGAATAACTGGAAGCCAAATTTAGTTTCTTATAATGCACTTATTGATGCATATAGTTCTAATGGCTGTTTGGCTGAAGCAGTTGAAGTGTTGCACGAAATGGAAAGGGAAGGAATTCAGCCTAATGTTGTCTCAATATCTACGCTTCTAGCAGCTTGTGGTCGATGTAGTGAGAAGGTCAAAATTGATTCGATACTCGTAGCTGCTCAGCAACGGGGCATTGAGTTAAATCTGGTTGCATACAACACAGCGATTGGGAGCTACTTCAATGTTGGGGAATATGACAAGGCTTTAGCTCTGTATAAATCTATGAGAAAGAAAAAAATCAAACCAGATTCTGTCACATATAATGTGTTGATAACTGGATGTTGTAAGATGTCAAAGTATGATGACGCTATTGATTTTCTTGATGAGATGATAACTCTGAATATTCCTATTTCCAAGGAGGTGTATACATCTGCGATCACTGCTTATATTAAACAGGGTCGATTTGCAGAGACAGAGTCTATGCTCACTAGGATGAAGGAAGCTGGTTGTCAGCCCGATATCATTACTTATACAAAAATGGTACAAGCTTATACTGCTACTGAGAAGTGGGAGAAGGCATTCACAATTTTTCAAGAGATGGAAACACATGGTATCCAACCAGATGCTATAGCTTGTTCAGCTCTCATGAGAGCATTCAACAAAGGAAATCAACCAACCAAGGTTCTTAGCCTGCTGGAATACATGAAAGAAAAAAAGCTCCCAGTTAGCGATGCTATATACTTCGAAGTCATATCAGCCTGTAGCTTGCTTCGAGACTGGAAGACCGCGATGAGTCTGATTAAAGTGATGGAACCATCGTTCCATGAACTTTCAACAGGACTTCTAAATCATCTGTTGCATTTTCTTGGAAAAGCTGGAAAAATGGAGACTATGATGAAGGTGTTTCTGAAGATAGTATCTTCTGGCGCCGAGATCAACTATCCTACCTATTCAATCTTGTTGAAAAACCTGTTGGCTGCAGGAAATTGGAGAAAGTACATTGAGGTTCTGCAGTGGATGGAAGATGCAGGAATCCAACCTTCACTTGAGATGTACAATGACGTGTTGTATTTTGCCCAAAAAAGTGGTGGGGCTGATGTAATGGCAGTCATTCAGGAGCGTATAGGTTCCTTAAAAAGTAGACCTAGGAGGTTGATTTCCTCGAACATGCTTTGTCAGTCTTCACTTTCAGCATCTGACATGACAGATGGAGCAATGACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100085.p1 GENE.R_Transcript_100085~~R_Transcript_100085.p1 ORF type:complete len:702 (+),score=107.26,PPR_2|PF13041.2|4.9e-12,PPR_2|PF13041.2|3.3e-10,PPR_2|PF13041.2|6.1e-10,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|8.2e-08,PPR_2|PF13041.2|3.1e-05,PPR_2|PF13041.2|5.3e-15,PPR_2|PF13041.2|1.6e-11,PPR_2|PF13041.2|6.8e-14,PPR_2|PF13041.2|1.1e-16,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|1.6e-09,PPR_2|PF13041.2|0.0062,PPR_2|PF13041.2|0.00033,PPR_2|PF13041.2|2.4,PPR|PF01535.16|3.9e-05,PPR|PF01535.16|0.00018,PPR|PF01535.16|5.2e-07,PPR|PF01535.16|2,PPR|PF01535.16|0.24,PPR|PF01535.16|0.006,PPR|PF01535.16|6.6e-06,PPR|PF01535.16|3.4e-05,PPR|PF01535.16|3.9e-09,PPR|PF01535.16|6.7e+03,PPR|PF01535.16|4.8e-05,PPR|PF01535.16|6.3e-08,PPR|PF01535.16|0.0038,PPR|PF01535.16|9e-05,PPR|PF01535.16|0.13,PPR|PF01535.16|27,PPR|PF01535.16|0.71,PPR|PF01535.16|3.7e+02,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|5.4e-06,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.034,PPR_3|PF13812.2|0.00019,PPR_3|PF13812.2|6.5e-05,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|7e+03,PPR_3|PF13812.2|0.0045,PPR_3|PF13812.2|0.00085,PPR_3|PF13812.2|0.00019,PPR_3|PF13812.2|0.00059,PPR_3|PF13812.2|17,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|7.7e+02,PPR_3|PF13812.2|0.0023,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|2.8e-05,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|29,PPR_1|PF12854.3|0.063,PPR_1|PF12854.3|1.8e-05,PPR_1|PF12854.3|0.0059,PPR_1|PF12854.3|5.2e-09,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.0028,PPR_1|PF12854.3|7.8e-11,PPR_1|PF12854.3|5.4e+02,PPR_1|PF12854.3|0.0053,PPR_1|PF12854.3|3e+02,PPR_1|PF12854.3|7.8e+02,PPR_1|PF12854.3|1.7e+03,TPR_11|PF13414.2|1.9e+02,TPR_11|PF13414.2|1.6,TPR_11|PF13414.2|0.54,TPR_11|PF13414.2|3.4e+02,TPR_11|PF13414.2|7.3e+03,TPR_11|PF13414.2|19,TPR_11|PF13414.2|0.062,TPR_11|PF13414.2|7.6e+03,TPR_7|PF13176.2|2.1,TPR_7|PF13176.2|1.5e+02,TPR_7|PF13176.2|5.3e+03,TPR_7|PF13176.2|9e+03,TPR_7|PF13176.2|3.6,TPR_7|PF13176.2|55,TPR_7|PF13176.2|9.2e+03,TPR_7|PF13176.2|2.2e+02,TPR_7|PF13176.2|7.2e+02,TPR_12|PF13424.2|2.4e+03,TPR_12|PF13424.2|13,TPR_12|PF13424.2|8.9,TPR_12|PF13424.2|2.4e+02,TPR_12|PF13424.2|1.4e+02,TPR_12|PF13424.2|4.3e+03,TPR_12|PF13424.2|4.5,TPR_12|PF13424.2|37,TPR_12|PF13424.2|69,ANAPC3|PF12895.3|18,ANAPC3|PF12895.3|4e+03,ANAPC3|PF12895.3|2.7e+03,ANAPC3|PF12895.3|0.00077,ANAPC3|PF12895.3|3.5e+02,TPR_1|PF00515.24|6.3e+03,TPR_1|PF00515.24|2.9,TPR_1|PF00515.24|6.1e+02,TPR_1|PF00515.24|2.3e+02,TPR_1|PF00515.24|5.3e+02,TPR_1|PF00515.24|6.2e+02,TPR_1|PF00515.24|1.6,TPR_1|PF00515.24|2.4,TPR_1|PF00515.24|1.1e+03,TPR_1|PF00515.24|9.3e+03,TPR_19|PF14559.2|3.7e+02,TPR_19|PF14559.2|5e+03,TPR_19|PF14559.2|77,TPR_19|PF14559.2|1e+03,TPR_19|PF14559.2|1.4e+03,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|1.2,TPR_19|PF14559.2|7.2e+03,ECSIT|PF06239.7|40,ECSIT|PF06239.7|4.3e+02,ECSIT|PF06239.7|4.8e+02,ECSIT|PF06239.7|11,ECSIT|PF06239.7|15,ECSIT|PF06239.7|1.3e+02,Clathrin|PF00637.16|80,Clathrin|PF00637.16|1.4e+03,Clathrin|PF00637.16|6.3e+02,Clathrin|PF00637.16|12,Clathrin|PF00637.16|3,Clathrin|PF00637.16|1.3e+02,TPR_10|PF13374.2|2.9e+03,TPR_10|PF13374.2|7.2e+02,TPR_10|PF13374.2|0.54,TPR_10|PF13374.2|7.7e+02,TPR_10|PF13374.2|26,TPR_10|PF13374.2|1.3e+03,TPR_10|PF13374.2|3.9e+03,TPR_10|PF13374.2|6.8e+02 R_Transcript_100085:640-2745(+)
MKNQKNYCARNDIYNMMIRLHARHNRVDQARGLFFEMQEWKCKPDAETYNALINAHGRAGQWHWGMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWREALKICKHMTDNGVGPDLVTHNIILSAYKTGAQYSKALSYYELMKGTNIRPDTTTLNIRIYCLVKLGQNGEAIDTFNSMRDKKSECQPDVVTFTSIMHMYSICGETENCKAVFDTMLAEGLAPNIVAYNTLLGAYASRGMSEEALAVFNEIKKTSLRPDVVSYTSLLNAYGRSQQPYKAKKTFHMMKRNNWKPNLVSYNALIDAYSSNGCLAEAVEVLHEMEREGIQPNVVSISTLLAACGRCSEKVKIDSILVAAQQRGIELNLVAYNTAIGSYFNVGEYDKALALYKSMRKKKIKPDSVTYNVLITGCCKMSKYDDAIDFLDEMITLNIPISKEVYTSAITAYIKQGRFAETESMLTRMKEAGCQPDIITYTKMVQAYTATEKWEKAFTIFQEMETHGIQPDAIACSALMRAFNKGNQPTKVLSLLEYMKEKKLPVSDAIYFEVISACSLLRDWKTAMSLIKVMEPSFHELSTGLLNHLLHFLGKAGKMETMMKVFLKIVSSGAEINYPTYSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSLEMYNDVLYFAQKSGGADVMAVIQERIGSLKSRPRRLISSNMLCQSSLSASDMTDGAMT*

Click here to download the sequence:
Link to NCBI Protein BLAST