Transcript Information: R_Transcript_100115.p1


Annotated TAIR IDAT1G53650.1
Annotated Gene NameCTC-interacting domain 8
Annotated Gene Symbol(s)CID8
Annotation TypeOrtholog
Chromosome Positionchr1:20029262-20031243 | Reverse length=314
E-Value6.8E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.898356058763
Replicate 230.128024724339
Replicate 334.978224710315
Condition 2: 8 Hour
Replicate 130.00490117345
Replicate 239.894652681734
Replicate 342.526630596335
Condition 3: 24 Hour
Replicate 141.834226503816
Replicate 239.069315749023
Replicate 340.162200981037


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100115.p1 GENE.R_Transcript_100115~~R_Transcript_100115.p1 ORF type:complete len:315 (+),score=67.80,RRM_1|PF00076.18|2e-12,RRM_1|PF00076.18|3.5e-08,RRM_6|PF14259.2|4.4e-10,RRM_6|PF14259.2|6.1e-08,RRM_5|PF13893.2|0.019,RRM_5|PF13893.2|0.0029 R_Transcript_100115:612-1556(+)
ATGGCTGCTGTTGCACAAAATGTTGTGAATTCTGATGATCAGTTCACTAAGGATTGCAACTCACCTACCCACAACAACAACAACAACAACTCTGAAACTGACACTAAAAGTTCGGATTCAAAATCAGAACTCCATAAGAACATTAATGAGCTTGCTGACATCTTGTCCAAGTTAAATCCTTGGGCTAAGGAGTTTGTTCCTTCTTCATACCGTCAGAAGAATGATCAGAACATTTTCCCTGTTGCCCCTAACAAGATTTCTGCTAATGACAATTTTCCCAACAATCGCAGGAGGAGAAATAATTTTAACCAGGGGAGGAGAAGGATGAATGGAAGAGCTTTCAGAGCTCAGCGAGAGGAAAGCATTAGGCGCACAGTATATGTCTCTGACATTGACCAGCATGTTACTGAAGAGAGGCTAGCTGCTTTGTTTAGTAGTTGTGGACAGGTTGTTGACTGCCGAATTTGTGGTGACCCTCATTCGGTTCTTCGTTTTGCTTTTGTAGAGTTTGCTGATGAACATGGTGCTAGAGCTGCTTTAAATCTTGGTGGGACTATGCTGGGATACTACCCAGTTAGAGTCTTGCCTTCGAAAACTGCCATACTCCCCGTTAATCCTACATTTCTTCCCAGGTCTGAAGATGAGAGAGAAATGTGTGCTAGGACTGTCTACTGTACAAATATTGATAAAAAGGTTTCTCAGGTTGATGTCAAGAATTTCTTTGAAAGTGCTTGTGGTGAGGTTTCTCGTCTGAGGCTTTTGGGGGACAATGTCCATTCTACTCGTATTGCCTTTGTTGAATTTACAATGGCTGAAAGTGCTATTATGGCCCTGAACTGCAGTGGAATGATTTTGGGAACCCAGCCCATAAGGGTGAGTCCTTCGAAGACGCCAGTGAGGCCGCGACTCCCTCGCCCCACATCAATTATCCCGCCATGCGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100115.p1 GENE.R_Transcript_100115~~R_Transcript_100115.p1 ORF type:complete len:315 (+),score=67.80,RRM_1|PF00076.18|2e-12,RRM_1|PF00076.18|3.5e-08,RRM_6|PF14259.2|4.4e-10,RRM_6|PF14259.2|6.1e-08,RRM_5|PF13893.2|0.019,RRM_5|PF13893.2|0.0029 R_Transcript_100115:612-1556(+)
MAAVAQNVVNSDDQFTKDCNSPTHNNNNNNSETDTKSSDSKSELHKNINELADILSKLNPWAKEFVPSSYRQKNDQNIFPVAPNKISANDNFPNNRRRRNNFNQGRRRMNGRAFRAQREESIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRICGDPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNIDKKVSQVDVKNFFESACGEVSRLRLLGDNVHSTRIAFVEFTMAESAIMALNCSGMILGTQPIRVSPSKTPVRPRLPRPTSIIPPCG*

Click here to download the sequence:
Link to NCBI Protein BLAST