Transcript Information: R_Transcript_100140.p1


Annotated TAIR IDAT4G15820.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: embryo defective 1703 (TAIR:AT3G61780.1); Has 524 Blast hits to 443 proteins in 102 species: Archae - 0; Bacteria - 13; Metazoa - 196; Fungi - 37; Plants - 43; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8992970-8995022 | Forward length=460
E-Value9.6E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6283260740967
Replicate 22.229401153553
Replicate 33.1946004888453
Condition 2: 8 Hour
Replicate 14.1909245868502
Replicate 23.8272190789985
Replicate 35.062889808539
Condition 3: 24 Hour
Replicate 14.1113030376079
Replicate 23.5651924038651
Replicate 34.0237301801586


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100140.p1 GENE.R_Transcript_100140~~R_Transcript_100140.p1 ORF type:complete len:631 (+),score=163.22 R_Transcript_100140:101-1993(+)
ATGGTGGCAACGGCAAGCATGGGTTATCCCATTGCCACCTCCATCTCACACACACACAAACCTCAAAACCCACCCACCATTAAATCCTCAATTCCAGTCCCATCATCTCCTCAAAAGCTCACAAAAAGAAAAAACTATTTGCGCCAAAAAATCCTCAAAACCCTCACTAAACCCTACCCTCTTTCTCCTCCAACTTCAGAAAATCCCATCACCCCTATTGAACCCGTTGACCCAAATCATGAATTTGAATTGCCCACTTCAGATAAGAGAGATTTAAGCATCGCCCAAGATTCAGAAGTATCATTTGAACAAGGTGTTCAAGCATCAGAGGTGAGTAAAGTTGAGAGTTTTAATTGGTTTTCAAGCCGTACAGTTGTTAGGATTGCTGTTTCTTTTGTGGGTCTTTTTATATTACAGACTGTTGTTGCTGTTTGGTTAATGGGTACTGGTGATTCTGATGACAAAGATAGGAACTTGGGAATTAAGGGCAGGGTTAGTGGAGTTAGCACTAATGCTAGGCTGGGGTTGAAAAAAGGGGAAATGGGGTTGGATGGGAAGGGTATTTGGGGGAATTGGGTGTCCCAAAATGTGGGGGGTGAGTTAGAAATGGAGGCTAAGATTGCTGAGATTAGGAAGATGGCAAGGGAAGCAAGAGAGCTTGAGAATAAAAGGAAGGCGAAGAGCGTTGACGTGGATGTAGGTGATGTTAGTGATGATGATGATGATGTTGAGAGTGATAGTCCTAGGATCAAGAGTGGGATTGTAGAGGAAGTTGATGGAAAGTTGAGTAAGCTGAGGATGAAATCATCATCACGGTTGGTGAATGTTAATTTGTTGAAAAAGTTAGGAAATAATGGTAAGGAAGGGAAAGATGATGACAATGTGGATGGCAAAGAGGAAGACAATATGTTGATGTTTGAGAGGAAGCATAGGTTTAGAAGTGATTTGACTACCCCAAGAGACGAAGCAGATGGATTTGAAATGATTAAAGGTGGTGCTAATGTAAGGGAGAAGCCTAGGGACAAGGGAGAGGTGAAACAAGTGGAGATGACTGGAAGTGATGGTGAGAATGGGGCGAGTACTTCGAATGAGAAGCAGGGAATAAATTGTCTTGGTAATAGCCTTCCTGAACGGAGCAATGTCGGTTTGCAAACAGATGAGAAGAAACCAGGGACTCAGAGTTCGGGTAGCTTACAAGCCTCAGCGAAGGGATTTGGAAGCAATGGTACAACAAAGAAGTTGAACCAATCGCAAGCCTCTAAGAAGACATCTCGAAGCAATAGTGCAACAAAGAAGTTGGACAAGAAAATCAACAGGGGTGCTGAACCACTAAGAGGTGTTGTCCAGGATTCTAACCATGGGATGTTTGTGGTTGATGGAGCTAATTCGAAAGATACCAGCATTGCTGCAACTCAAGTTCCTCAAAGGAAAATGAGCAACGAGGATGGCTTAACAATGTCCAAGACACATGCGATGTCACTCCAAAAAGGACAACCAAATTCTGACAGACTTGGAAGCAGAGAGAAGGATACATGGTGGTTTACTCTTCCATACGTTCTGGTTATTTTGATGCAGAACGGTACTGATAATGAAGGAGAACAAGGTTTTTTTACCGTAAGGATTTTTTCTGATGAGACTCATTCATACACTCCTTACATTGTTGGTTTTGAAGACCTCGTTGATGCAAAGAACTTCCGTTATCTTCTAGAATCGTGTTTTGAGGAGTTGCCTGATGCTACTATAGATATTGTTCCAATATCAGCAAAGGAACTTAGAGAGTTCATTGAGTCACTCAACAAGAAAGTGATTGTAGTAAAGAAGGGAGAGCTGCGGCTTTATGCTGGTCAGCCACTTGCTGAAGTTGAATCTGCTCTGGGATCCTTGGTGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100140.p1 GENE.R_Transcript_100140~~R_Transcript_100140.p1 ORF type:complete len:631 (+),score=163.22 R_Transcript_100140:101-1993(+)
MVATASMGYPIATSISHTHKPQNPPTIKSSIPVPSSPQKLTKRKNYLRQKILKTLTKPYPLSPPTSENPITPIEPVDPNHEFELPTSDKRDLSIAQDSEVSFEQGVQASEVSKVESFNWFSSRTVVRIAVSFVGLFILQTVVAVWLMGTGDSDDKDRNLGIKGRVSGVSTNARLGLKKGEMGLDGKGIWGNWVSQNVGGELEMEAKIAEIRKMAREARELENKRKAKSVDVDVGDVSDDDDDVESDSPRIKSGIVEEVDGKLSKLRMKSSSRLVNVNLLKKLGNNGKEGKDDDNVDGKEEDNMLMFERKHRFRSDLTTPRDEADGFEMIKGGANVREKPRDKGEVKQVEMTGSDGENGASTSNEKQGINCLGNSLPERSNVGLQTDEKKPGTQSSGSLQASAKGFGSNGTTKKLNQSQASKKTSRSNSATKKLDKKINRGAEPLRGVVQDSNHGMFVVDGANSKDTSIAATQVPQRKMSNEDGLTMSKTHAMSLQKGQPNSDRLGSREKDTWWFTLPYVLVILMQNGTDNEGEQGFFTVRIFSDETHSYTPYIVGFEDLVDAKNFRYLLESCFEELPDATIDIVPISAKELREFIESLNKKVIVVKKGELRLYAGQPLAEVESALGSLVK*

Click here to download the sequence:
Link to NCBI Protein BLAST