Transcript Information: R_Transcript_100146.p2


Annotated TAIR IDAT4G15820.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: embryo defective 1703 (TAIR:AT3G61780.1); Has 524 Blast hits to 443 proteins in 102 species: Archae - 0; Bacteria - 13; Metazoa - 196; Fungi - 37; Plants - 43; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:8992970-8995022 | Forward length=460
E-Value6E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5394063455787
Replicate 21.2648373744758
Replicate 31.0119442311553
Condition 2: 8 Hour
Replicate 12.1634097543751
Replicate 21.7062520280423
Replicate 31.6766547962606
Condition 3: 24 Hour
Replicate 11.19860037735
Replicate 20.3543013476398
Replicate 32.1096582830744


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100146.p2 GENE.R_Transcript_100146~~R_Transcript_100146.p2 ORF type:3prime_partial len:249 (+),score=57.58 R_Transcript_100146:1149-1892(+)
ATGACTGGAAGTGATGGTGAGAATGGGGCGAGTACTTCGAATGAGAAGCAGGGAATAAATGGTCTTGGTAGTAGCCTTCCTGAACGTAGCAATGTCGGTTTGCAAACAGATGAGAAGAAACCAGGGACTCAGAGTTCGGGTAGCTTACAAGCCTCAGCGAAGGGATTTGGAAGCAATGGTACAACAAAGAAGTTGAGCCAGTCGCAAGCCTCTAAGAAGACATCTCGAAGCAATAGTGCAACAAAGAAGTTGGACAAGAAAATCAACAGGGGTGCTGAACCACTAAGAGATACCAGCATTGCTGCAACTCAAGTTCCTCAAAGGAAAATGAGCAACGAGGATGGCTTAACAATGTCCAAGACACATGCGATGTCACTCCAAAAAGGACAACCAAATTCTGACAGACTTGGAAGCAGAGAGAAGGATACATGGTGGTTTACTCTTCCATACGTTCTGGTTATTTTGATGCAGAACGGTACTGATAATGAAGGAGAACAAGGTTTTTTTACCGTAAGGATTTTTTCTGATGAGACTCATTCATACACTCCTTACATTGTTGGTTTTGAAGACCTCGTTGATGCAAAGAACTTCCGTTATCTTCTAGAATCGTGTTTTGAGGAGTTGCCTGATGCTACTATAGATATTGTTCCAATATCAGCAAAGGAACTTAGAGAGTTCATTGAGTCACTCAACAAGAAAGTGATTGTAGTAAAGAAGGGAGAGCTGCGGCTTTATGCTGGTCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100146.p2 GENE.R_Transcript_100146~~R_Transcript_100146.p2 ORF type:3prime_partial len:249 (+),score=57.58 R_Transcript_100146:1149-1892(+)
MTGSDGENGASTSNEKQGINGLGSSLPERSNVGLQTDEKKPGTQSSGSLQASAKGFGSNGTTKKLSQSQASKKTSRSNSATKKLDKKINRGAEPLRDTSIAATQVPQRKMSNEDGLTMSKTHAMSLQKGQPNSDRLGSREKDTWWFTLPYVLVILMQNGTDNEGEQGFFTVRIFSDETHSYTPYIVGFEDLVDAKNFRYLLESCFEELPDATIDIVPISAKELREFIESLNKKVIVVKKGELRLYAGQ

Click here to download the sequence:
Link to NCBI Protein BLAST