Transcript Information: R_Transcript_100147.p1


Annotated TAIR IDAT1G13630.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4669784-4672826 | Reverse length=806
E-Value2E-209
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1703501475282
Replicate 20.38834094481439
Replicate 30.53665599793699
Condition 2: 8 Hour
Replicate 10.60384377181862
Replicate 20.68929968684296
Replicate 30.69383468462638
Condition 3: 24 Hour
Replicate 10.53785245046409
Replicate 20.57109794907783
Replicate 30.89062176901062


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100147.p1 GENE.R_Transcript_100147~~R_Transcript_100147.p1 ORF type:complete len:811 (+),score=138.04,PPR_2|PF13041.2|0.00044,PPR_2|PF13041.2|0.00027,PPR_2|PF13041.2|2.9e-11,PPR_2|PF13041.2|9.4e-13,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|7.1e-13,PPR_2|PF13041.2|5e-07,PPR_2|PF13041.2|0.56,PPR_2|PF13041.2|3.8e-15,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|1e-13,PPR_2|PF13041.2|8.4e-16,PPR_2|PF13041.2|3.3e-07,PPR_2|PF13041.2|0.8,PPR_1|PF12854.3|9.1e+02,PPR_1|PF12854.3|85,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|0.007,PPR_1|PF12854.3|5.2e-09,PPR_1|PF12854.3|1,PPR_1|PF12854.3|4.2e-06,PPR_1|PF12854.3|7.7e-09,PPR_1|PF12854.3|9.7e-08,PPR_1|PF12854.3|4.8,PPR_1|PF12854.3|0.00059,PPR_1|PF12854.3|1.7e-09,PPR_1|PF12854.3|2.9e-09,PPR_1|PF12854.3|6.4e-08,PPR_1|PF12854.3|2.6e-11,PPR_1|PF12854.3|1.5e-05,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|8.3e+02,PPR|PF01535.16|0.47,PPR|PF01535.16|4.2e+03,PPR|PF01535.16|9e+03,PPR|PF01535.16|0.22,PPR|PF01535.16|0.0002,PPR|PF01535.16|9.1e-07,PPR|PF01535.16|0.83,PPR|PF01535.16|0.0052,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|0.004,PPR|PF01535.16|0.54,PPR|PF01535.16|6.3e-05,PPR|PF01535.16|8.7e-08,PPR|PF01535.16|2.9e-06,PPR|PF01535.16|3.6e-05,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|0.097,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|6.2e+02,PPR_3|PF13812.2|32,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|3.8e+02,PPR_3|PF13812.2|0.0032,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|50,PPR_3|PF13812.2|0.00084,PPR_3|PF13812.2|4,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|0.00017,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|3.9e-05,PPR_3|PF13812.2|4.4e-05,PPR_3|PF13812.2|78,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|4.3e+03,MRP-S27|PF10037.5|1.5e+02,MRP-S27|PF10037.5|2.7e+03,MRP-S27|PF10037.5|0.92,MRP-S27|PF10037.5|5.2,MRP-S27|PF10037.5|21,MRP-S27|PF10037.5|5.6 R_Transcript_100147:67-2499(+)
ATGCTCAATCGCTTCCACCATTGGAAACCTCATCACTTCCCTTTCTCTCTCCACCCTTTCCCCTTTCGATTGAGCCCCCTTTTCTCCCCCAAATCCCCTTTCGCTGCTTTTGCCCTAATTTCCGAAGAAATCCCTAATCCAAACCCTACTGACTCTGTTCAAGAAATTGTCACTCAATTAAAAAACTTTGGGCCCTATAAATTTGTGGGTAGCCCTTATTTTCAAAGAAATTTAGGGTCCAAATTGGATTTGGGCACTGTTGATCAAATTATTGATAGATTGAGGGTTGAAAACCCGGAATCAGCAGTTGAGTTTTTCTGGGCTTTGAAGGATGAATTTGGGTTTCGGCATTCGAGGGTTTCTGGGTTTGTTGTGGCTCACCTTCTTGCAGGGAAGAAAAGGATTAAGCAGGTTCAGGCAGTGTTGAGAGGATTGATTCAAGATGAGGGACCTGGCTCTGTGTCTTCTGTATGTGAGTTTCTTGAGAAGGCATTCAAGGACTGGGATTCCAACAATATTGTCTGGGATGTATTGGCTTTTGTTTATTCAAGACATGAGATGCTGCATGAGGCTCTGCTTGTTTTAGCAAAGATGAAGGATCTGAATTTTCAACCATCAATAAACACCTATAATAGTCTGTTGCAAATTCTGAGGTCCACTACTTTTCTATGGGATGTATATGATGAAATAAAAACAAGAGGAGTACCACAAAACAATTACACAAATGCCATTCTTATAGATGGTCTCTGCAGGCAGTCAATGCTCCAAGAAGCTGTAGAGTTTTGGCGACAGACTGAATTGAAGGAGAATAGGGCTTCTGTTGTCTCATCGAATACCCTTTTGTCAGCTTTTTGCAGAATGGGCCTCATTAACACTGCAAAGTCTTTCTTTTGCTTGATGTTCAAATGTGGAATTATTGCTAATACTTATAGCTATAATATCCTTATTCATGGATTGTGTGTGGTTGGATCCTTGGAGGAAGCTTTGCAGTTTGTAGATGACATGGAGAAGCTTGGAGTTGAATCTGATATTGTGACGTATAATTCTCTTGCAAAAGGGTTTTATCTACTTGGTTTTGTAGGTGGGGTTGAGCAGGTCATCCATACTATGATGCTTAAGGGTCTTGACCCCAATTTTACCACCTATAAGATATTGCGACATGGTTATTGCCAGACAGGCAACACAGAGGAAGCAATTAGAGGGCTGCATGAGATGACTTCTCAGGGTATTCCGATGAATGTTATCTCTTACAGCATCTTACTCAGTTGCTTGTGTAAGGCAGGGCAATTTGAGAAGGCAATCACTTTAATTGATGAGATGGACTCCATGGGACTAAAAGCAGATTTTTTTGTGTACTCTATTCTTGTACACTCTCTCTGCAAGATAGGGGAAGTGCAGAAGGCCATCCAACTGTGTGATGACATGTATTTAAGAAGAATCATTCCAAGTTCGTATTCTCAAGGAGCTATTCTATCTGGGCTATGTGCTAAAGGGATGATGGCAGAGGCAAGAATGTATTTTAATGCCTTGGAAAAGGCGGGTTTAGCTGAGGATGTTGTTTTGTTCAATATAATGATTAATGGATACATAAAGATTGGTAAAAATGTAGATGCTGTACAGTTATACAAGAAAATGTTGGAAACACGGATTAATCCAAGTATAGTCACATTTAATACTTTGATAGATGGGTTCTGCAAAAGTGGAAAACTCTGGATGGCTAGAAGATGCTTCGAGGAAATTCTGAAGCATGGACTTCTACCAAATGTGGTAACTTATACCACTCTAATGGATGGGTACTGTAAAGATGGCGATACAAATGCCATGCTTGTGCTACTTCAGGACATGGTGGCAAAAAATGTCTACCCAAGTCATATTACATACACTATTGTTATCAAAGGTCTCTGCAGACAAGGGAGATGGCAAGAATCTTTCCAAGTGCTTGCAAATATGCACGTCAAGGGTTTGAAACCTGATCAGATCACTTATAATACCATTATTCAGTGTCTTTGTGGAGCTGGGAACGTGAAAAGAGCATTACAGCTGCACAATGAGATGTTACTGCTAAATATTCAACCTACTTCCGTCACTTACAATATCCTCCTTAATGGCCTTTGTATATATGCTGACCTAAATGATGCTGAGATGCTTTTTTGTTTTCTTCAACATCAGCCTATTGCTTTAACGAAAATTGCTTACACCACAATGATAAAAGCACATTGTGTCAAGGGCGATATGCATAAAGCAGTTTTAATTTTCAAATGCATGCTGCATAATGGTTTTGAGGTCAACATCAAGGATTTTAGTGCCATCATTAGTAGATTGTGTGGAAGGGCTTTCCTTGCCGAAGCAAAACTTTTCCTCGGTATAATGTTGTCAAAAGGCATTTCACCTGACAAGGAACTTTATGGAATGCTTGAAAAGGCCTTCTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100147.p1 GENE.R_Transcript_100147~~R_Transcript_100147.p1 ORF type:complete len:811 (+),score=138.04,PPR_2|PF13041.2|0.00044,PPR_2|PF13041.2|0.00027,PPR_2|PF13041.2|2.9e-11,PPR_2|PF13041.2|9.4e-13,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|7.1e-13,PPR_2|PF13041.2|5e-07,PPR_2|PF13041.2|0.56,PPR_2|PF13041.2|3.8e-15,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|1e-13,PPR_2|PF13041.2|8.4e-16,PPR_2|PF13041.2|3.3e-07,PPR_2|PF13041.2|0.8,PPR_1|PF12854.3|9.1e+02,PPR_1|PF12854.3|85,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|0.007,PPR_1|PF12854.3|5.2e-09,PPR_1|PF12854.3|1,PPR_1|PF12854.3|4.2e-06,PPR_1|PF12854.3|7.7e-09,PPR_1|PF12854.3|9.7e-08,PPR_1|PF12854.3|4.8,PPR_1|PF12854.3|0.00059,PPR_1|PF12854.3|1.7e-09,PPR_1|PF12854.3|2.9e-09,PPR_1|PF12854.3|6.4e-08,PPR_1|PF12854.3|2.6e-11,PPR_1|PF12854.3|1.5e-05,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|8.3e+02,PPR|PF01535.16|0.47,PPR|PF01535.16|4.2e+03,PPR|PF01535.16|9e+03,PPR|PF01535.16|0.22,PPR|PF01535.16|0.0002,PPR|PF01535.16|9.1e-07,PPR|PF01535.16|0.83,PPR|PF01535.16|0.0052,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|0.004,PPR|PF01535.16|0.54,PPR|PF01535.16|6.3e-05,PPR|PF01535.16|8.7e-08,PPR|PF01535.16|2.9e-06,PPR|PF01535.16|3.6e-05,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|0.097,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|6.2e+02,PPR_3|PF13812.2|32,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|3.8e+02,PPR_3|PF13812.2|0.0032,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|50,PPR_3|PF13812.2|0.00084,PPR_3|PF13812.2|4,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|0.00017,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|3.9e-05,PPR_3|PF13812.2|4.4e-05,PPR_3|PF13812.2|78,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|4.3e+03,MRP-S27|PF10037.5|1.5e+02,MRP-S27|PF10037.5|2.7e+03,MRP-S27|PF10037.5|0.92,MRP-S27|PF10037.5|5.2,MRP-S27|PF10037.5|21,MRP-S27|PF10037.5|5.6 R_Transcript_100147:67-2499(+)
MLNRFHHWKPHHFPFSLHPFPFRLSPLFSPKSPFAAFALISEEIPNPNPTDSVQEIVTQLKNFGPYKFVGSPYFQRNLGSKLDLGTVDQIIDRLRVENPESAVEFFWALKDEFGFRHSRVSGFVVAHLLAGKKRIKQVQAVLRGLIQDEGPGSVSSVCEFLEKAFKDWDSNNIVWDVLAFVYSRHEMLHEALLVLAKMKDLNFQPSINTYNSLLQILRSTTFLWDVYDEIKTRGVPQNNYTNAILIDGLCRQSMLQEAVEFWRQTELKENRASVVSSNTLLSAFCRMGLINTAKSFFCLMFKCGIIANTYSYNILIHGLCVVGSLEEALQFVDDMEKLGVESDIVTYNSLAKGFYLLGFVGGVEQVIHTMMLKGLDPNFTTYKILRHGYCQTGNTEEAIRGLHEMTSQGIPMNVISYSILLSCLCKAGQFEKAITLIDEMDSMGLKADFFVYSILVHSLCKIGEVQKAIQLCDDMYLRRIIPSSYSQGAILSGLCAKGMMAEARMYFNALEKAGLAEDVVLFNIMINGYIKIGKNVDAVQLYKKMLETRINPSIVTFNTLIDGFCKSGKLWMARRCFEEILKHGLLPNVVTYTTLMDGYCKDGDTNAMLVLLQDMVAKNVYPSHITYTIVIKGLCRQGRWQESFQVLANMHVKGLKPDQITYNTIIQCLCGAGNVKRALQLHNEMLLLNIQPTSVTYNILLNGLCIYADLNDAEMLFCFLQHQPIALTKIAYTTMIKAHCVKGDMHKAVLIFKCMLHNGFEVNIKDFSAIISRLCGRAFLAEAKLFLGIMLSKGISPDKELYGMLEKAFF*

Click here to download the sequence:
Link to NCBI Protein BLAST