Transcript Information: R_Transcript_100285.p1


Annotated TAIR IDAT1G11440.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 19337 Blast hits to 8589 proteins in 488 species: Archae - 26; Bacteria - 641; Metazoa - 7852; Fungi - 2167; Plants - 955; Viruses - 616; Other Eukaryotes - 7080 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3849418-3850509 | Forward length=363
E-Value2.4E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9663667549075
Replicate 29.1936463361305
Replicate 38.3358837997833
Condition 2: 8 Hour
Replicate 18.9105366523999
Replicate 28.9311214454439
Replicate 38.4850724201809
Condition 3: 24 Hour
Replicate 14.4149629284046
Replicate 26.7209812595546
Replicate 34.7272261601879


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100285.p1 GENE.R_Transcript_100285~~R_Transcript_100285.p1 ORF type:complete len:338 (+),score=73.47 R_Transcript_100285:577-1590(+)
ATGTCATACTACTACCCCTCAAATTATCATCAACCCTATGATAGTAATTACCAGTATCATCAACCCTATACTCACTACTACAATTCAAGCTACGATTACAATCAAAATGTCCAAAATTATGATGCCCAATATCCTTATGTCAATGGGTATCAATACCAACATGTTCAAGCTCCATCTTTGATTGGGTATTACTATTCAACTTCCTATGATCAACATGAAGCTCCAACAACCAAAGTTGTAAGTTTCCAGGATCCTGTTTCAACAGAAATTGTAGAAACCAAATCAAAACCAAGTGATCAAGAAGCTCAAAATGATCTAGATTTTGAGGAGTATAATCCAGAGCCATATCATGGAGGGTATAACATGAGTGAAACATATGGGACACCTTTGCCCCCATCAGAAGATATTTGTTACCCACTTTCTCGAACTCAAGCGGCTCAAGATCAAGATCTTGAGACTGAAGCAAAACCATCAGATGGGGTTGTCGAAAAAGTGATGGAAAATGAAGATCAAGGCTCAGAATCCCACCAAAAGCAAGAAGAACAAGAAGAACAACAACAAGAATTACAAGAAGAAGATGAAGATGAAGATGACGATGAAGATGAAGATGAAGAAGAAGTAATAGTAAGGAGACAAATGCCACCAGGGTATGGATTGGAAGCTATTGATTTATGTGAAGGAGTGTTTGGAGGGTATTTCCCCTGTTTGTGGAAGAGAAATCATCAGAATTCTAATCAGGGGAGTTATGATTATGATAATTATCAAAGTTATGGTGGTAATCAAGGAAATAGTGAAGCTGATTATTGGAAAGGAACAGTTGATTATCTGTTTGGGAACCCGGATCCTTATGGTGGATCCATGCCCGAGAGAGGTAGCTATGGAGATCCGGTTTATAGCTATCAAAGGTATTATCCTCAACAACCTACAAGTATTTGTGAGCAAGTTGAGGATGTGGGGAGTTATTCATGGATGCCCAACTCAGGGTATTATCAGGTTAATAATGTTGATTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100285.p1 GENE.R_Transcript_100285~~R_Transcript_100285.p1 ORF type:complete len:338 (+),score=73.47 R_Transcript_100285:577-1590(+)
MSYYYPSNYHQPYDSNYQYHQPYTHYYNSSYDYNQNVQNYDAQYPYVNGYQYQHVQAPSLIGYYYSTSYDQHEAPTTKVVSFQDPVSTEIVETKSKPSDQEAQNDLDFEEYNPEPYHGGYNMSETYGTPLPPSEDICYPLSRTQAAQDQDLETEAKPSDGVVEKVMENEDQGSESHQKQEEQEEQQQELQEEDEDEDDDEDEDEEEVIVRRQMPPGYGLEAIDLCEGVFGGYFPCLWKRNHQNSNQGSYDYDNYQSYGGNQGNSEADYWKGTVDYLFGNPDPYGGSMPERGSYGDPVYSYQRYYPQQPTSICEQVEDVGSYSWMPNSGYYQVNNVDY*

Click here to download the sequence:
Link to NCBI Protein BLAST