| Annotated TAIR ID | AT3G49500.1 |
| Annotated Gene Name | RNA-dependent RNA polymerase 6 |
| Annotated Gene Symbol(s) | RDR6, SGS2, SDE1 |
| Annotation Type | Ortholog |
| Chromosome Position | chr3:18349193-18353205 | Reverse length=1196 |
| E-Value | 0 |
| Replicate 1 | 7.7816845129803 |
| Replicate 2 | 3.3023982442853 |
| Replicate 3 | 5.4043213699532 |
| Replicate 1 | 4.7228530899902 |
| Replicate 2 | 5.9789443995885 |
| Replicate 3 | 7.7685287175001 |
| Replicate 1 | 6.252581604234 |
| Replicate 2 | 5.0573731065314 |
| Replicate 3 | 7.1026326467415 |
>R_Transcript_100292.p1 GENE.R_Transcript_100292~~R_Transcript_100292.p1 ORF type:complete len:1208 (+),score=218.14,RdRP|PF05183.8|8.5e-184 R_Transcript_100292:306-3929(+)
ATGGGATCAGAGCATAATGAAATGGATATGGTGATGACACAGCTCAGCTTCGGTGGTTTTCACAATGAAGTGACTGCCAAAAGGTTTACAGACTACCTCGAAGATGAAATGGGGGTAGTTGTTTGGAGGTGCAGACTGAAGAGATCATGGACTCCTCCAGAGTCATACCCAGACTTCAAAATTCAGAATATCGAAGACGTAGAGAACGCAAATGATTATGAGAGGGTGGAGCCTCATGCCTTTGTGCATTTCGCTAGTCCTGACTCAGTTCGATGGGTTTTGGATGCTGCTGGGCGTGGTGATCTTGTATGGTTGGGGAAACCGTTGAAAGTCAGTTCAGGGCCTGGGAATCCTTTCCGGCTTAGTCAGAGGAGGAGAACCACAACACCATTAAAGTTGTCCGATGTGCGTCTTGATGTCGGTGTTCTTGCTAGTCGGGACGAGTTCCTTGTTGGTTGGAGAGGACCTGATACTGGGTTTGATTTTTTGGTAGATCCCTTTGATGGAACGTGCAAATTTCGGTTCACGAGAGAAACAGTTTTTGCTTTCAAAGGTGAAAACAAAAAAGCTGTAATGAAATGTGATTTCAAAATTGAGTTCTTGGTCAGGGACATTAATGAGATCAAACGTTATAAGGACTTCTCGGGTCTGGTTATTCTGTTGCAACTGTCCTCGGCTCCCTTGATCTATTACCGAACTGCTGATGACGACATTTATGAATCGGTTCCGTTTGATTTGTTGGATGATGATGACCCTTGGATTCGGACAGTAGACTTTACTTCAAGTGGGGCATTTGGTAGGTGTAATTCATACAGAATATCCATGCGTCCTCGTAATGGTCCCAATCTGGAGAGAGCTATTAACCATCTTATGGAAAGGCGGGTCCCTATTGACAGTCCTAGACAGCAGCCGAGTGTAAAAGATGAACCTCAATTTGGTGTGCCAATGTTAGATCCGTTTTTCTGTCTACAGTATGTAGAGAAAGTGTCCTTTGATGTAACATTTATGCTGAATGCTGTTCTCCACAAAGGAATTATAAACCAGCACCAAATATCAGAAAAATTCTTGGATTTACTTGCAACTCAAGCATCAGACGTCAATCTGGCCGCACTGAGACATATTTGTTCTTACAAGCGGCCACTTTATGATGCTTTCAAGAGACTGAAGGTGGTCCAGGATTGGCTGCTGAAGAACCCAAAGCTTCTCAAGGAACCTCAGCCATTGGCTGACGTTGTGGAGGTCAGGAGGTTGATCATCACTCCCACTAAAGCATACTGTCTTCCGCCAGAAGTTGAACTTTCAAATCGGGTTCTTAGGCAGTACAAGCACGTATCAGATAGGTTTTTAAGGGTAACATTCATGGATGAAGGCATGCAGATGCTAAATTCCAATGTCCTTTCATACTATGCTTCCCCAATCGTGAAGATGATAACATCAAACTCTTATCTTCAAAGAACGTCAGTGTTCAAGAGGGTCAACTCTATATTAAAGCATGGTTTCTACTTATGTGGCAGAATGTACACTTTCTTGGCGTTCTCGTCCAACCAGTTGAGAGATCGTTCTGCCTGGTTCTTTGCTGAGGACAAGAATGATAGGAATTTGACTGCGAATAACATTAGAAACTGGATGGGCAAGTTTAAAGAGAGGAATGTTGCAAAATGTGCTGCTAGGATGGGACTGTGCTTCTCATCCACATACGCAACAGTCAAAGTTTCACCAGATGAGGTGGAGTCAGAGCTGCCGGATATAAAAAGAAATACTTATATCTTTTCTGATGGAATTGGTATGATAACACCCGACCTTGCAATGGAGGTTGCAGAAAAGTTGCAACTGAAAGACAACCCACCTTCGGCTTATCAGATCAGATTTGGTGGTTGCAAAGGTGTTGTGGCCCGCTGGCCTGGAAAGGACAAAGGAATCAGGCTGTATCTCCGGACAAGCATGAACAAGTTTCAATCTAAGCATGCAGTTGTTGAAGTGTGTTCTTGGACGAGGTTTCAACCGGGATTTCTGAACAGGCAGATTGTCACATTACTCTCCGCTCTGGAGGTTCCCGATGAGGTGTTTTGGGGAATGCAGGAATCCATGGTTTCTAAACTCGATCAAATGCTTGTGAACTCAGAAGCTGCATATGATGTCCTGACGACATCATGTGCTGAGCAAGGCAATACTGCCGCGATTATGTTAAGTGCTGGTTTCAAGCCACAAACGGAGCCTCACCTTCGAGGCATGCTAACTTGCATAAGGGCAGGTCAGTTGGGAGATCTTAGAGAAAAGGCTAGGATTTTTGTTCCCTCGGGTAGGTGGTTAATGGGCTGCTTGGACGAGGCTGGTGTGCTCGAACAAGGGCAGTGCTTTGTGCAGGTGTCCAGCCCTTCACTTGAAAACTGCTTCTCCAAGCATGGGTCCAGGTTTTCTGAAATGAAGCAGAGCTTACAAGTAATTAAGGGGCTCATTGTGGTTGCAAAAAATCCTTGTCTCCACCCCGGAGATATACGGATCTTGGAAGCGGTGGATGCCCCCGAATTGCACCATCTTTCTGACTGCCTTGTCTTCCCACAAAAGGGGGAGAGACCTCATCCAAATGAGGCATCAGGAAGTGATCTGGATGGCGATCTTTACTTCGTTACGTGGGATGAGAATCTCATCCCTCCTAGTAAGCGAAGCTGGATACCCATGGAGTATACACCGGCCGATGAGAAAAAATTGCCTCGTCCAGTCACCAATCTGGACATAATCGACTTTTTCACCAAGAACATGGTTAATGAGAACTTGGGCACAATCTGCAATGCCCACGTTGTTCATGCTGATCTAAGTCTTTATGGAGCGTTGGACGAAAATTGCCTCAAGCTAGCTGAACTTGCTGCGTTAGCTGTTGACTTCCCCAAAACCGGCAAGGTGGTGACCATGCCTGCCGAACTCAAGCCCAGAATGTACCCCGACTTCATGGGAAAACCTGAATCTCAATCTTACAAGTCTGACAAGATCTTGGGTAGAATGTACAGGCGGATCAGAGATGCCTACCACAACCATGACATGACTCCATCTTCTGCATTGAACTTTTCCTCTCGAGATATACCATATGATACGGAGCTCGAGGTTCCGGGTTCAGATGACTTCATCAACGAGGCTTGGGCTCTTAAGTGCTCGTATGTCAGACAGCTCACTGGCCTCCTTGCTCAGTATAAAGTCAGCAAGGAAGAGGAGATTGTCACAGGGCATCTATGGTCGATGCCAAGGCACAGCAGTAGGAAGCAAGGTGAACTCAAGGAAAAGCTCAAGCATGCCTACAATTGTCTGAAGCGAGAATTCAGGCAACATTTTGATAAACTGGGAGCCGAGTATGAGCAGCTAGGAGAGGAGGAGAAGAATACAGCATACGAGCAAAAGGCATCGGCATGGTATCAGGTTACTTACAATTCTGAATGGGTAAGAAGATCAATTGAATTGCAAGGACCTGATGGTGAAGGAGACGGGGGTACCATTTTGAGCTTTGCTTGGATCGCTGCTGATTACCTTGCTCGTATCAAGGTAAGGCACAGTGGAAAGCAATCTCGGGACTACACTAAGAAGCCGATTAATTCACTGGCTATGTATCTTGCTGAGCGGATGCAGATAAGATGA
Click here to download the sequence:
Link to NCBI Nucleotide BLAST
>R_Transcript_100292.p1 GENE.R_Transcript_100292~~R_Transcript_100292.p1 ORF type:complete len:1208 (+),score=218.14,RdRP|PF05183.8|8.5e-184 R_Transcript_100292:306-3929(+)
MGSEHNEMDMVMTQLSFGGFHNEVTAKRFTDYLEDEMGVVVWRCRLKRSWTPPESYPDFKIQNIEDVENANDYERVEPHAFVHFASPDSVRWVLDAAGRGDLVWLGKPLKVSSGPGNPFRLSQRRRTTTPLKLSDVRLDVGVLASRDEFLVGWRGPDTGFDFLVDPFDGTCKFRFTRETVFAFKGENKKAVMKCDFKIEFLVRDINEIKRYKDFSGLVILLQLSSAPLIYYRTADDDIYESVPFDLLDDDDPWIRTVDFTSSGAFGRCNSYRISMRPRNGPNLERAINHLMERRVPIDSPRQQPSVKDEPQFGVPMLDPFFCLQYVEKVSFDVTFMLNAVLHKGIINQHQISEKFLDLLATQASDVNLAALRHICSYKRPLYDAFKRLKVVQDWLLKNPKLLKEPQPLADVVEVRRLIITPTKAYCLPPEVELSNRVLRQYKHVSDRFLRVTFMDEGMQMLNSNVLSYYASPIVKMITSNSYLQRTSVFKRVNSILKHGFYLCGRMYTFLAFSSNQLRDRSAWFFAEDKNDRNLTANNIRNWMGKFKERNVAKCAARMGLCFSSTYATVKVSPDEVESELPDIKRNTYIFSDGIGMITPDLAMEVAEKLQLKDNPPSAYQIRFGGCKGVVARWPGKDKGIRLYLRTSMNKFQSKHAVVEVCSWTRFQPGFLNRQIVTLLSALEVPDEVFWGMQESMVSKLDQMLVNSEAAYDVLTTSCAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAGQLGDLREKARIFVPSGRWLMGCLDEAGVLEQGQCFVQVSSPSLENCFSKHGSRFSEMKQSLQVIKGLIVVAKNPCLHPGDIRILEAVDAPELHHLSDCLVFPQKGERPHPNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMEYTPADEKKLPRPVTNLDIIDFFTKNMVNENLGTICNAHVVHADLSLYGALDENCLKLAELAALAVDFPKTGKVVTMPAELKPRMYPDFMGKPESQSYKSDKILGRMYRRIRDAYHNHDMTPSSALNFSSRDIPYDTELEVPGSDDFINEAWALKCSYVRQLTGLLAQYKVSKEEEIVTGHLWSMPRHSSRKQGELKEKLKHAYNCLKREFRQHFDKLGAEYEQLGEEEKNTAYEQKASAWYQVTYNSEWVRRSIELQGPDGEGDGGTILSFAWIAADYLARIKVRHSGKQSRDYTKKPINSLAMYLAERMQIR*
Click here to download the sequence:
Link to NCBI Protein BLAST