Transcript Information: R_Transcript_100444.p2


Annotated TAIR IDAT5G33340.1
Annotated Gene NameEukaryotic aspartyl protease family protein
Annotated Gene Symbol(s)CDR1
Annotation TypeHomolog
Chromosome Positionchr5:12594474-12595787 | Forward length=437
E-Value5E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5491868523064
Replicate 22.7495155307057
Replicate 32.4542933138735
Condition 2: 8 Hour
Replicate 12.0404887456038
Replicate 23.2831453496979
Replicate 32.737147633233
Condition 3: 24 Hour
Replicate 13.1885843371811
Replicate 22.0129799781083
Replicate 33.2136709262508


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100444.p2 GENE.R_Transcript_100444~~R_Transcript_100444.p2 ORF type:3prime_partial len:252 (+),score=4.45,TAXi_N|PF14543.2|3.6e-18 R_Transcript_100444:1869-2621(+)
ATGGCAAACCTCACAATATTATCCTCCCTAGTGTTGGTCTTTCTATGCAGCCTATGTGAAGCAATCCATACAAACGAAGCGAAAAATGGTTTGAGCATGAAATTGATTCATCATGCGTCCAAAGAATCACCTTCATACAAACCTAATGTAACTAGAGAACAAATAATGGAGACAATCATTCAAATGTCAAATTCAAGAGTTCAATCCCTTATGTTCAACCTTGGCAAATTCAACTCCACAAACAATACACCTATCATTCGACCCTCGATTCGCGATTTTGGTCAGTATAATTACCTGGTACAAGTGGGAATTGGAACATCTGATAACACCCCTTACAGCTATGGACCATATTACTTGGTGCTAGACACTGGAAGTGGCTTCATATGGACCCAATGTGAAGGTTGCAACCCTTGTTTTGAACAAAGAGATGATGTTTTTCCAAGGACTCGATCTCATACCTACCATCCATTACCTTGCGATGAATGTCCTCAAGGTTCAACATGCCAACAAGATCACTGTAACTTTGAGATGAAATATACGAATCGTGCCCACATTAAGGGAATTTTTGCAACAGAAACATTCGCCCTTCAAACTGACGGTCACCAACTTCTTAAACGCCCCAACCTGGTTTTTGCTTGTGCGCTCTGGAGTCAAAACTTTTATCCTGGTTCTAGGTACGGCAGCAACAATGCTGCGAGTAGAGGTGTCCATTCGGGTTATCGGATCGGTTTCGGGCGGGTACAATTCGGAGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100444.p2 GENE.R_Transcript_100444~~R_Transcript_100444.p2 ORF type:3prime_partial len:252 (+),score=4.45,TAXi_N|PF14543.2|3.6e-18 R_Transcript_100444:1869-2621(+)
MANLTILSSLVLVFLCSLCEAIHTNEAKNGLSMKLIHHASKESPSYKPNVTREQIMETIIQMSNSRVQSLMFNLGKFNSTNNTPIIRPSIRDFGQYNYLVQVGIGTSDNTPYSYGPYYLVLDTGSGFIWTQCEGCNPCFEQRDDVFPRTRSHTYHPLPCDECPQGSTCQQDHCNFEMKYTNRAHIKGIFATETFALQTDGHQLLKRPNLVFACALWSQNFYPGSRYGSNNAASRGVHSGYRIGFGRVQFGD

Click here to download the sequence:
Link to NCBI Protein BLAST