Transcript Information: R_Transcript_100456.p1


Annotated TAIR IDAT4G15850.1
Annotated Gene NameRNA helicase 1
Annotated Gene Symbol(s)ATRH1, RH1
Annotation TypeOrtholog
Chromosome Positionchr4:9001426-9004534 | Forward length=522
E-Value1.4E-249
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3105917228565
Replicate 24.8950912338576
Replicate 34.9432651459905
Condition 2: 8 Hour
Replicate 14.4819984007482
Replicate 26.0749216562759
Replicate 35.9456142687202
Condition 3: 24 Hour
Replicate 17.1660207531562
Replicate 26.076882507423
Replicate 36.1150620030831


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100456.p1 GENE.R_Transcript_100456~~R_Transcript_100456.p1 ORF type:complete len:519 (+),score=108.37,DEAD|PF00270.25|5.7e-33,DEAD|PF00270.25|5.4e+03,Helicase_C|PF00271.27|8.2e-22,ResIII|PF04851.11|1.1e-07,ResIII|PF04851.11|2.3e+03 R_Transcript_100456:212-1768(+)
ATGGGTGAAACACAGCCCAAAGCTCAAAAGAATATACCGGTGCTTCCATGGATGCGGAACCCAGTTGACATTACTGCCATTGAGGAATGCCGTCTCCCTCTCCTCCCTCGCCTTGATCCCAGATTAGATGAAGCTCTGAAGACTATGGGTATCTCTTCGTTGTTCCCAGTTCAAGTTGCAGTTTGGCAAGAGACAATTGGTCCTGGTGCTTTTGAGCGAGACCTATGTATAAATTCACCGACTGGAAGTGGGAAAACATTGGCATATGCTCTACCTATTGTACAAACCCTAGCAAGTTGCTCAGTGAAATGTCTACGTGCTTTAGTGGTCTTACCCACTCGTGATTTAGCTTTACAGGTTAAAGACGTCTTTGCTGCCATTGCTCCAGCTGTGGGCTTGTCTGTTGGTTTGGCTGTCGGGCAGTCTTCCATTGCTGATGAAATATCTGCATTAATTAAGAGACCTAGACTTGAGGCTGGGTGCTGTTATGACCCTGACGATCGTGCAGAGAGATTACAAAGTGCAGTAGACATACTGGTGGCGACTCCTGGGAGACTTATGGACCATATTAATACCACCAAGGGCTTCACACTCGAGCATCTACGATATCTTGTAGTTGATGAAACAGATCGGTTGCTGAGGGAGGCTTATCAGTCTTGGTTGCCTACTGTGCTTAAGTTGGCCCAACCTAGCTATGATGTATTTGCACCCCATCCCCAAAATTTTTCCACATTAATTTCTAGTTCCTTCAAAACAATTAGGAGATTTGGAGTTGAAAGAGGATTTAAGGGGAAAGCTCAACCTAGGCTTGTGAAGATGGTTCTTTCTGCGACACTGACACAAGATCCTAGCAAGCTTGCTCAGCTTGATCTTCATCACCCTCTTTTTTTGACCACTGGCCAAACACGTTATCAGTTTCCTGAAAAGCTTGAGTCCTACAAAGTGATTTGTGAATCGGAAGATAAACCAGTATATCTGGTAGCCCTTCTTCAGCAGTTGAAGGGTGAGAAAAGCATTGTCTTTACATCTTCTGTACAATCAACCCATTGGTTATGCAGCTTGCTGAAATTTTTTGGTGATCTGAATATTAAGATCAAGGAGTACTCAGGTTTGCAACGACAAGCTTTAAGAAGCAAAACATTGAAGGCATTCCGGAAAGGGGATGTAGATGTGCTTGTTTCTTCTGATGCTATGACCAGAGGGATGGATGTTGAAGGGGTGAAAAATGTAATCAATTATGATGTCCCACCTTATATCAAGACACATATTCATCGAGCTGGACGGACAGCGAGAGCGGGTCAAGCTGGGCGCTGCTTCACTTTGCTACGGACAGATGAAATGAAGCGATTCAAGAAACTGCTGCATAAAGCAGAGGGCAGTTCCTGTAAAGCCTACACCCTTCCATCCGACTCAATCAAATCACTTCAATCTGTTTATGTAACTGCATTTGATAAACTGAAAGAGAGTATTCAGTCTGAAGCACCTCGAAGACGGAAGTTTGATTTCAAGCCTTCAGGACCTGGCAGAGGAAAGGGTACACACAAATCCAAGAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100456.p1 GENE.R_Transcript_100456~~R_Transcript_100456.p1 ORF type:complete len:519 (+),score=108.37,DEAD|PF00270.25|5.7e-33,DEAD|PF00270.25|5.4e+03,Helicase_C|PF00271.27|8.2e-22,ResIII|PF04851.11|1.1e-07,ResIII|PF04851.11|2.3e+03 R_Transcript_100456:212-1768(+)
MGETQPKAQKNIPVLPWMRNPVDITAIEECRLPLLPRLDPRLDEALKTMGISSLFPVQVAVWQETIGPGAFERDLCINSPTGSGKTLAYALPIVQTLASCSVKCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISALIKRPRLEAGCCYDPDDRAERLQSAVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLKLAQPSYDVFAPHPQNFSTLISSSFKTIRRFGVERGFKGKAQPRLVKMVLSATLTQDPSKLAQLDLHHPLFLTTGQTRYQFPEKLESYKVICESEDKPVYLVALLQQLKGEKSIVFTSSVQSTHWLCSLLKFFGDLNIKIKEYSGLQRQALRSKTLKAFRKGDVDVLVSSDAMTRGMDVEGVKNVINYDVPPYIKTHIHRAGRTARAGQAGRCFTLLRTDEMKRFKKLLHKAEGSSCKAYTLPSDSIKSLQSVYVTAFDKLKESIQSEAPRRRKFDFKPSGPGRGKGTHKSKN*

Click here to download the sequence:
Link to NCBI Protein BLAST