Transcript Information: R_Transcript_10079.p1


Annotated TAIR IDAT1G80420.1
Annotated Gene NameBRCT domain-containing DNA repair protein
Annotated Gene Symbol(s)ATXRCC1
Annotation TypeOrtholog
Chromosome Positionchr1:30235444-30237163 | Reverse length=353
E-Value1.9E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6789308694513
Replicate 210.625246457642
Replicate 39.7617089998132
Condition 2: 8 Hour
Replicate 110.37536650307
Replicate 212.88593190848
Replicate 311.471114701988
Condition 3: 24 Hour
Replicate 19.3943569527409
Replicate 28.3842025322534
Replicate 311.07634450257


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10079.p1 GENE.R_Transcript_10079~~R_Transcript_10079.p1 ORF type:complete len:413 (+),score=91.26,BRCT|PF00533.22|5.5e-10,PTCB-BRCT|PF12738.3|6.1e-07 R_Transcript_10079:168-1406(+)
ATGTCTTCTTCAAACACAAGACCTAGTAATGGTGCTGGTAAGAACCCAAAGCGAGGCTTACCCTCTTGGATGAGTGCAAGAGACGATGGCAATGGAGATAAACCAGCTACTGACAGCATGGACGACGAGAGTCAAGTGGATGGTTCACAGAAAAAAGCAAGAGGGCAAGCAAATGCACCTAAAGACAAATGTCAGGAATCAGGAAGCGGAAAGAAAACCTCTTCAGGTGGTCCGAGTGCATTGGATTTCTCCAAACTTTTGGATGGAGTAGTTTTTGTGCTCTCTGGCTTTGTGAATCCTGAACGAGGGATATTGCGGTCACAGGCCCTGGAAATGGGGGCAGAATATCATCCGGACTGGAACTCCAATTGCACTCTTTTAGTTTGTGCATTTCCCAACACTCCAAAATTTCTACAAGTTGAAGCGGACTGCGGAACAATTGTTTCAAAGGACTGGATAACACAGTGCTACACCCAAAAGAAGCTTGTTGATATTGAAACTTATCTTATGCATGTTGGTAAGCCATGGAGGAAAAGCAATGTATCTCGTGCAGGGAACCAAGGAGTAATATCAACCCAGTGGATGGCTGCAGTTCATGAAACTTCACCAAGTAAATCTTGCAAACAAGAAGTTAAACGAGCACAAGCAGAGTCTAATTCTTCTACTGCCTCAAAGGGGTTGACTGGGGATTCATCTATAAGTCTTGAAGAAAAATTCTCTCCTCCCAGGGTGAAGAAATGGGCACTTGATGATTTGAACAGAACCCTCTCATGGCTTGAGTGTCAGGAAGATAAGCCGGAGCCAGGCGAGATAAAGAATGTAGCCGCTGAAGGCGTCTTGACATGCTTGCAGGATGCCATCGAGTTGCTTGGCAGAAAGCAGGATTTATGGCAATTGACTGAACAGTGGAACACTGTCCCTCGTGTGGTTGAAGAATTGACTGAAACCCAGGGCTCTTCAAAATCTTCTCCTGCAGTTTCTGATGAAGATCTTCACAAACTGGCTCTAACATGTAAGACGATCTATGAGGACGAACTGAAGCAAATATCAAAAAGTTCAAGCAAGAGAAATCAAGAGCCAAAGTCTGACAATCGGGAGAAAGGCAAAGGCAAACATGCTGCAACTCAAGACATAGCTAGAAATTCAATGGATTATGACAGCGATGAAACAATTGAAATGACCGAAGAGGAAATAAACGATGCCTACTCTAGTATCATATCAAAGATGCCCAACTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10079.p1 GENE.R_Transcript_10079~~R_Transcript_10079.p1 ORF type:complete len:413 (+),score=91.26,BRCT|PF00533.22|5.5e-10,PTCB-BRCT|PF12738.3|6.1e-07 R_Transcript_10079:168-1406(+)
MSSSNTRPSNGAGKNPKRGLPSWMSARDDGNGDKPATDSMDDESQVDGSQKKARGQANAPKDKCQESGSGKKTSSGGPSALDFSKLLDGVVFVLSGFVNPERGILRSQALEMGAEYHPDWNSNCTLLVCAFPNTPKFLQVEADCGTIVSKDWITQCYTQKKLVDIETYLMHVGKPWRKSNVSRAGNQGVISTQWMAAVHETSPSKSCKQEVKRAQAESNSSTASKGLTGDSSISLEEKFSPPRVKKWALDDLNRTLSWLECQEDKPEPGEIKNVAAEGVLTCLQDAIELLGRKQDLWQLTEQWNTVPRVVEELTETQGSSKSSPAVSDEDLHKLALTCKTIYEDELKQISKSSSKRNQEPKSDNREKGKGKHAATQDIARNSMDYDSDETIEMTEEEINDAYSSIISKMPNS*

Click here to download the sequence:
Link to NCBI Protein BLAST