Transcript Information: R_Transcript_100824.p1


Annotated TAIR IDAT1G52360.2
Annotated Gene NameCoatomer, beta' subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19499420-19505397 | Forward length=970
E-Value5.2E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9922886811014
Replicate 27.297074898779
Replicate 34.956867807692
Condition 2: 8 Hour
Replicate 18.1084339661369
Replicate 23.5190896012358
Replicate 35.2371860150625
Condition 3: 24 Hour
Replicate 13.9141179535758
Replicate 22.9648052934874
Replicate 33.3728594107678


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100824.p1 GENE.R_Transcript_100824~~R_Transcript_100824.p1 ORF type:complete len:305 (+),score=55.78,WD40|PF00400.28|12,WD40|PF00400.28|0.12,WD40|PF00400.28|3.2e-06,WD40|PF00400.28|0.00032,WD40|PF00400.28|3.9e-06,WD40|PF00400.28|1.9e-05,BBS2_Mid|PF14783.2|34,BBS2_Mid|PF14783.2|4.5,BBS2_Mid|PF14783.2|14,BBS2_Mid|PF14783.2|0.13 R_Transcript_100824:236-1150(+)
ATGTCTCTCATTGGTGAATTTCAGGTTGAATTTACACAAAAATCAGCAAGAGTGAAGTCATTGGATCTTCATCCACTACAACCATGGATTTTGGTTGGTCTATATTCAGGGAATGTGGAAGTATGGAATTACCAATCAAAGAAATTGGAGAAGTCTTTCGAGGTTTCAAGCAATGTCCCAGTGAGATCAGCAAAGTTTGTAGCAAGAAAGGGTTGGATTGTGACAGGAAGCGATGACAAGTTTATTCGAGTATATGACTATAACACTGAAGAAAAGGTTAAGGAATTTGAGGCACATGAAGATTACATTAGGTGCATTGTTGTTCATCCCACCCTTCCTCATGTAATCTCGGCATCTGATGATAAGCATATCAAACTTTGGGACTGGGAGAAGGAATGGATTTGTACTCAAACTTTTGAGGGACATTCCCACTATGTGATGCAAGTGGCATTCAACCCTATTGACCACAACAATTTTGCAAGTGCATCTCTAGATGGTTCAATTAAGATTTGGAATCTCGGCAACTCAAACCCTGTGACAACAATAGATGCCCATGAAAAAGGAGTAAATTGTGTCAATTACTTCACTAATGAAGGCAAACTATATCTAGTGACGGGTTCTGATGACCACACCACAAAGGTATGGGACTACAAATCATTGAGCTGCAATAAGGTGTTAGAAGGTCACACCAACAATGTTACCACCATACTCACTCATCCCGAGCTTCCTAATCTTATACTTACTGGTTCAGAGGATAAAAATGTTTATGTATGGGATGCAGCCACTTCCAAGCTGGAGATGACCCTAGATCAAGGTCTTGGACGAGTATGGATTATTGAATTTGAGAAAACCACAAGCAAGTTTATTATTGGCTGTGATGAAGGATTTCTAATTGGGAAAATCGTCGGTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100824.p1 GENE.R_Transcript_100824~~R_Transcript_100824.p1 ORF type:complete len:305 (+),score=55.78,WD40|PF00400.28|12,WD40|PF00400.28|0.12,WD40|PF00400.28|3.2e-06,WD40|PF00400.28|0.00032,WD40|PF00400.28|3.9e-06,WD40|PF00400.28|1.9e-05,BBS2_Mid|PF14783.2|34,BBS2_Mid|PF14783.2|4.5,BBS2_Mid|PF14783.2|14,BBS2_Mid|PF14783.2|0.13 R_Transcript_100824:236-1150(+)
MSLIGEFQVEFTQKSARVKSLDLHPLQPWILVGLYSGNVEVWNYQSKKLEKSFEVSSNVPVRSAKFVARKGWIVTGSDDKFIRVYDYNTEEKVKEFEAHEDYIRCIVVHPTLPHVISASDDKHIKLWDWEKEWICTQTFEGHSHYVMQVAFNPIDHNNFASASLDGSIKIWNLGNSNPVTTIDAHEKGVNCVNYFTNEGKLYLVTGSDDHTTKVWDYKSLSCNKVLEGHTNNVTTILTHPELPNLILTGSEDKNVYVWDAATSKLEMTLDQGLGRVWIIEFEKTTSKFIIGCDEGFLIGKIVGA*

Click here to download the sequence:
Link to NCBI Protein BLAST