Transcript Information: R_Transcript_10084.p1


Annotated TAIR IDAT1G80420.1
Annotated Gene NameBRCT domain-containing DNA repair protein
Annotated Gene Symbol(s)ATXRCC1
Annotation TypeHomolog
Chromosome Positionchr1:30235444-30237163 | Reverse length=353
E-Value6E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8126778079966
Replicate 23.510635439381
Replicate 33.1671695068635
Condition 2: 8 Hour
Replicate 14.5664957136341
Replicate 25.7519953289223
Replicate 35.0194164416504
Condition 3: 24 Hour
Replicate 16.7913770577131
Replicate 25.4606267992748
Replicate 35.4191423179778


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10084.p1 GENE.R_Transcript_10084~~R_Transcript_10084.p1 ORF type:complete len:311 (+),score=72.11,BRCT|PF00533.22|5.5e-10,PTCB-BRCT|PF12738.3|9.1e-08 R_Transcript_10084:162-1094(+)
ATGTCTTCTTCAAACACAAGACCTAGTAATGGTGCTGGTAAGAACCCAAAGCGAGGCTTACCCTCTTGGATGAGTGCAAGAGACGACAGTAATGGAGATAAACCAGATAATGACAGCATGGATGACGAGAGTCAAGTGGACGGTTTGCAGAAAAAAACAAGAGGGCAAGCAAATGTACCTAAAGACAAATGTCAGGAATCAGGAAGCGGAAAGAAAACCTCTTCAGGTGGTCCGAGTGCATTGGATTTCTCCAAACTTTTGGATGGAGTAGTTTTTGTGCTCTCTGGCTTTGTGAATCCTGAACGAGGGATATTGCGGTCACAGGCCCTGGAAATGGGGGCAGAATATCATCCGGACTGGAACTCCAATTGCACTCTTTTAGTTTGTGCATTTCCCAACACCCCAAAATTTCGCCAAGTTGAAGCAGACTGTGGAACAATTGTTTCAAAGGACTGGATAACACAGTGCTACACCCAAAAGAAGCTTGTTGATATTGAAACTTATCTTATGCATGTTGGTAAGCCATGGAGGATTGTGCAGGGAACCAAGTGGATGGCTGCAGTTCATGAAACTTCACCAAGTAAATCTTGCAAACAAGAAGTTAAACGAGCACAAGCAGAGTCTAATTCTTCTACTGCCTCAAAGGGATTGACTGGTGATTCATCTATAAGTCTTGAAGAGAAATTCTCTCCTTCCAGGGTGAAGAAATGGGCACTTGATGATTTGAACAGAACCCTCTCATGGCTTGAGAGTCAGGAAGAGAAGCCGGAGCCAGGTGAGATAAAGAATGTAGCTGCTGAAGGCGTCTTGACATGCTTGCAGGATGCCATCGAGTTGCTTGGCAGAAAGCAGGCATATCCATGTGTGGTCTGTCAAACGGCCCTGAAGTTCACTCCCGCCCCCCCCTCCCTGCAAACCCCCCCCCCCCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10084.p1 GENE.R_Transcript_10084~~R_Transcript_10084.p1 ORF type:complete len:311 (+),score=72.11,BRCT|PF00533.22|5.5e-10,PTCB-BRCT|PF12738.3|9.1e-08 R_Transcript_10084:162-1094(+)
MSSSNTRPSNGAGKNPKRGLPSWMSARDDSNGDKPDNDSMDDESQVDGLQKKTRGQANVPKDKCQESGSGKKTSSGGPSALDFSKLLDGVVFVLSGFVNPERGILRSQALEMGAEYHPDWNSNCTLLVCAFPNTPKFRQVEADCGTIVSKDWITQCYTQKKLVDIETYLMHVGKPWRIVQGTKWMAAVHETSPSKSCKQEVKRAQAESNSSTASKGLTGDSSISLEEKFSPSRVKKWALDDLNRTLSWLESQEEKPEPGEIKNVAAEGVLTCLQDAIELLGRKQAYPCVVCQTALKFTPAPPSLQTPPPL*

Click here to download the sequence:
Link to NCBI Protein BLAST