Transcript Information: R_Transcript_100902.p1


Annotated TAIR IDAT1G19980.1
Annotated Gene Namecytomatrix protein-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6933162-6934643 | Forward length=342
E-Value4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52797820943401
Replicate 20.52056943180904
Replicate 30.66259158335978
Condition 2: 8 Hour
Replicate 10.70826882078808
Replicate 20.5544020291203
Replicate 30.37503327728072
Condition 3: 24 Hour
Replicate 11.233270636199
Replicate 21.0025117677535
Replicate 30.81400554620693


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100902.p1 GENE.R_Transcript_100902~~R_Transcript_100902.p1 ORF type:5prime_partial len:242 (+),score=57.26,DUF5082|PF16888.1|0.006,DUF5082|PF16888.1|0.11,DUF641|PF04859.8|0.01,DUF641|PF04859.8|0.06 R_Transcript_100902:2-727(+)
TTGTTAAGAGCTATAACTACTGCTGGCCTACCGGTGTTAAAGAACTGGTCAAATGAACCATCATCATCTAGCTTGACAGGCAGCAGGAAGAGCAGATCAAGGAATGCATCTCAGGAGGAAGAAACTTATCTGCAGCAGCTAAAGGCTGCAGTTGCAAGTCTAAGAGCCAAAATCACTGAGGTGGAGGCTGAGTCAAATAAAAAAGATGGAGAGATCTCCAGACTGACCAAAGAATTAGAGTCGTTAAGAGCTATAACACCTGCTGGGCTACCAGTTTTAAAGAATTGCGCAAGCAAACCATCACCATCTAGCTTGACAGGCAGCAGGAAGAGCAGAACTAGGAGTGCAGCTCAGGAGGAAGAAACTTCTCCTAAGGAGCCGGAGGCTACAGTTGCAACTCTAAGAGCCAAAATTACTGAGTTGGAGTCTGAGACAAACAGCAAAAATGGAGAAATCCTCACATTGTCAAAGGAATTGCAGTTGTTAAGATCAAAAACTGCTGCTGATACTCCTGCTTTAAAACGTTGCACAGGCGAGCCTTCAGATTCTAGGACAAGAGGCAGAGGGAATGGCAGTAATAAAAGGAAATTAGCATCTTCTGCGGAGCTGGTCATAGAGCAAGGCAGAAGAGGCTCGAGAAAACAAGCAAAAGTTGTCACAAACGAGACTCCAAAGTTATTCACATCCCAGTTCAGAGTACCAATATTGAAGAGCCAATCTCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100902.p1 GENE.R_Transcript_100902~~R_Transcript_100902.p1 ORF type:5prime_partial len:242 (+),score=57.26,DUF5082|PF16888.1|0.006,DUF5082|PF16888.1|0.11,DUF641|PF04859.8|0.01,DUF641|PF04859.8|0.06 R_Transcript_100902:2-727(+)
LLRAITTAGLPVLKNWSNEPSSSSLTGSRKSRSRNASQEEETYLQQLKAAVASLRAKITEVEAESNKKDGEISRLTKELESLRAITPAGLPVLKNCASKPSPSSLTGSRKSRTRSAAQEEETSPKEPEATVATLRAKITELESETNSKNGEILTLSKELQLLRSKTAADTPALKRCTGEPSDSRTRGRGNGSNKRKLASSAELVIEQGRRGSRKQAKVVTNETPKLFTSQFRVPILKSQSP*

Click here to download the sequence:
Link to NCBI Protein BLAST