Transcript Information: R_Transcript_100904.p1


Annotated TAIR IDAT1G19980.1
Annotated Gene Namecytomatrix protein-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6933162-6934643 | Forward length=342
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9526423346908
Replicate 21.1718865348631
Replicate 32.13085931127
Condition 2: 8 Hour
Replicate 11.2527651833474
Replicate 21.8720738285644
Replicate 31.1819653427229
Condition 3: 24 Hour
Replicate 12.1356099746702
Replicate 21.1284085944016
Replicate 32.2396721074965


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100904.p1 GENE.R_Transcript_100904~~R_Transcript_100904.p1 ORF type:5prime_partial len:215 (+),score=53.70,DUF5082|PF16888.1|0.062,DUF5082|PF16888.1|0.064 R_Transcript_100904:2-646(+)
TTGTTAAGAGCTATAACTACTGCTGGCCTACCGGTGTTAAAGAACTGGTCAAATGAACCATCATCATCTAGCTTGACAGGCAGCAGGAAGAGCAGATTGAGGAGGAGTGCAGCTCAGGAGGAAAAAACTTATCCTATGCAGCTGGAGGCTGCAGTTGCAAGTCTAAGAGCCAAAATCACTGAGGTGGAGGCTGAGTCAAATAAAAAAGATGGAGAGATCTCCAGACTGACCAAAGAATTAGAGTCGTTCAGAGCTATAACTACTGCTGGGCTACCGGTTTTAAAGAATTTCGCAAACAAACCATCATCATCTAGCTTGACAGGCAGCAGGAAGAGCAGAACTAGGAGTGCAGCTCAGGAGGAAGAAACTTCTCCTAAGGAGCCGGAGGCTACAGTTGCAACTCTAAGAGCCAAAATTACTGAGTTGGAGTCTGAGACAAACAGCAAAAATGGAGAAATCCTCACATTGTCAAAGGAATTGCAGTTGTTAAGATCAAAAACTGCTGCTGATACTCCTGCTTTAAAACGTTGCACAGGCGAGCCTTCAGATTCTAGGACAAGAGGCAGAGGGAATGGCAGTAATAAAAGGAAATTAGCATCTTCCGCGGAGCTGGTCATAGAGCAAATGGAAGGTGCTATATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100904.p1 GENE.R_Transcript_100904~~R_Transcript_100904.p1 ORF type:5prime_partial len:215 (+),score=53.70,DUF5082|PF16888.1|0.062,DUF5082|PF16888.1|0.064 R_Transcript_100904:2-646(+)
LLRAITTAGLPVLKNWSNEPSSSSLTGSRKSRLRRSAAQEEKTYPMQLEAAVASLRAKITEVEAESNKKDGEISRLTKELESFRAITTAGLPVLKNFANKPSSSSLTGSRKSRTRSAAQEEETSPKEPEATVATLRAKITELESETNSKNGEILTLSKELQLLRSKTAADTPALKRCTGEPSDSRTRGRGNGSNKRKLASSAELVIEQMEGAIF*

Click here to download the sequence:
Link to NCBI Protein BLAST