Transcript Information: R_Transcript_100923.p1


Annotated TAIR IDAT4G12290.1
Annotated Gene NameCopper amine oxidase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7304434-7306973 | Forward length=741
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3495347729564
Replicate 22.9209729229285
Replicate 33.123646035839
Condition 2: 8 Hour
Replicate 15.4300609593753
Replicate 26.221622771239
Replicate 35.6755035961816
Condition 3: 24 Hour
Replicate 15.3125504328572
Replicate 24.2834593713105
Replicate 36.4818960160922


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100923.p1 GENE.R_Transcript_100923~~R_Transcript_100923.p1 ORF type:complete len:726 (+),score=102.55,Cu_amine_oxid|PF01179.16|4.3e-136,Cu_amine_oxidN3|PF02728.12|9.1e+03,Cu_amine_oxidN3|PF02728.12|5.4e-27,Cu_amine_oxidN2|PF02727.12|1.5e-20 R_Transcript_100923:60-2237(+)
ATGGAAGGACGGAAGTTCTTAAGCTTCATTTCTCTACTCTTTGGACTTTTCATCCTTGTCTTTGTATTCACTTGGAATACTGACCTTCTCCCTTACAACACTCTCCACTCCCTTAACAAACTTGCTGAGGAGCTTGAGCTTGATCACCCTACTCACCACCTCACGCGCCGCCGCCACCACGACCACTCATCCGACGTTCCCCACCACCCTCTAGACCCCTTAACGGTCCAGGAGCTGAACCGGGTCCGGTCCATCCTTACCTCTCACTCGCTCTTCCGGTCGTCTTCTTCCAAGTCCTACGCGCTTCACTCGGTTGTTCTTGATGAGCCCCCTAAGTCACGTGTCCTCCTATGGAGGGGAGGGGATCCCTTGCCTCCTAGGAAGGCTTCTGTTATTGCACGTGTCGATGGCGAGTCGCACGTGCTTATCGTTGACATAGGGACAGGCCGGGTCTCCCGAGTTGGTTCGGGCCCCGTGTCTGGGTACCCGACTATGACTATTGAGGATATGAACACTGCTACTGTTACTCCCTTCTCGAGTTCCGAGTTTAATCGGACCGTGGTGGATCGTGGTGTTGATTTGGTTGATGTAGCTTGCTTGCCTATTTCTACTGGATGGTATGGGAAGAAAGAGGAAAAGAGGAGGTTAATTAAGGTACAATGCTACTCTATGAAGGAAACAGCCAACTTTTACATGAGGCCCATTGAAGGTTTGACAGTACTCGTAGATATGGACACAAATCAAGTGGTGGAGATTTCAGATCGTGGAAGGGACATACCCATCCCAAAGGCTGCCAACACAGACTATCGCTTCTCAGTCCTGAACAAAGCCCATCACAAAATCAGGCCAATCAACCCAATATCTATTGAGCAGCCCAAAGGCCCAAGTTTCACCGTTGAAAATGGACATCAGATCAAATGGGCAAACTGGGAATTTCACCTCAAACCCGACCCAAGAGCTGGGGTGATCATCTCTCGGGCCATGGTCCGAGACCCGGATACTGGAGAGCTAAGGAATGTCATGTATAAAGGGATGACCTCAGAGTTGTTTGTGCCTTACATGGATCCAACTGATGCATGGTATTTTAAGACGTATATGGATGCAGGTGAATATGGGTTTGGGTTACAGGCAATGCCCCTTGACCCGCTTAATGATTGCCCCAGGAATGCATACTACATGGATGGTGTGTTTGCTGCTGGTGATGGGAAGCCGTATATTCGAGAGAATATGGTCTGTGTTTATGAGAGCTATGCAGGTGATATTGGGTGGCGTCATTCCGAGAGTCCAATCACAGGAATGGAGATTCGTGAAGTCCGGCCGAAAGTGACATTAGTGGTTAGAATGGCAGCGTCAGTGGCTAACTACGATTACATTATGGACTGGGAATTTCAAACTGATGGACTCATTAGAATCAAGGTTGGGCTGAGTGGTATCTTGATGGTGAAGGGCACACCATACATGAACTTAAACCAAGTACCCAACCAAGAAAATCTTCATGGTACTATGTTGTCTGAAAATACCATTGGAGTTATCCATGACCACTACATCACATACTATCTCGACATGGACGTTGATGGATCGGATAATTCGTTTGTGAAAGTAAACCTCCAAAGGCAGCAAACCTCGGCTGGGGAGTCACCCCGGACAAGCTACTTGAAGACCATACGAAATCTTGCCAAGACGGAGAAGGATGCACAAATTAAGCTCAAGCTTTATGACCCCTCTGAGTTCCATATGATCAACCCAAATAAAAAGACTCGGGTGGGTAACCCAGTTGGATACAAGGTGGTTCCTGCTGGTACAGCAGCCAGCCTACTTGATCTAGAAGATCCACCTCAAAAGAGAGGAGCATTCACCAACAACCAAATATGGGTCACTCCATATAACCGAAGTGAGATTTGGGCTGGTGGGTTGTTTGTTTACCAGAGCCACGGCGAAGACACCCTTGCGACATGGTCAGAGAGGGATCGATCAATAGAGAACAAGGATATAGTGCTATGGTATACCTTAGGATTCCATCACATACCATGCCAAGAGGACTTCCCAATAATGCCAACAGTATCATCAAGCTTTGATTTGAAGCCTGTCAATTTCTTTGAAAGCAATCCCATCCTTGGAATTTCACCAAACTTTGAAAAGGACCTACCAGTTTGCCAAGCTGCTGCTTCTTCTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100923.p1 GENE.R_Transcript_100923~~R_Transcript_100923.p1 ORF type:complete len:726 (+),score=102.55,Cu_amine_oxid|PF01179.16|4.3e-136,Cu_amine_oxidN3|PF02728.12|9.1e+03,Cu_amine_oxidN3|PF02728.12|5.4e-27,Cu_amine_oxidN2|PF02727.12|1.5e-20 R_Transcript_100923:60-2237(+)
MEGRKFLSFISLLFGLFILVFVFTWNTDLLPYNTLHSLNKLAEELELDHPTHHLTRRRHHDHSSDVPHHPLDPLTVQELNRVRSILTSHSLFRSSSSKSYALHSVVLDEPPKSRVLLWRGGDPLPPRKASVIARVDGESHVLIVDIGTGRVSRVGSGPVSGYPTMTIEDMNTATVTPFSSSEFNRTVVDRGVDLVDVACLPISTGWYGKKEEKRRLIKVQCYSMKETANFYMRPIEGLTVLVDMDTNQVVEISDRGRDIPIPKAANTDYRFSVLNKAHHKIRPINPISIEQPKGPSFTVENGHQIKWANWEFHLKPDPRAGVIISRAMVRDPDTGELRNVMYKGMTSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAYYMDGVFAAGDGKPYIRENMVCVYESYAGDIGWRHSESPITGMEIREVRPKVTLVVRMAASVANYDYIMDWEFQTDGLIRIKVGLSGILMVKGTPYMNLNQVPNQENLHGTMLSENTIGVIHDHYITYYLDMDVDGSDNSFVKVNLQRQQTSAGESPRTSYLKTIRNLAKTEKDAQIKLKLYDPSEFHMINPNKKTRVGNPVGYKVVPAGTAASLLDLEDPPQKRGAFTNNQIWVTPYNRSEIWAGGLFVYQSHGEDTLATWSERDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILGISPNFEKDLPVCQAAASSA*

Click here to download the sequence:
Link to NCBI Protein BLAST