Transcript Information: R_Transcript_100963.p1


Annotated TAIR IDAT1G15360.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)SHN1, WIN1
Annotation TypeHomolog
Chromosome Positionchr1:5283609-5284506 | Forward length=199
E-Value2E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.79360699803125
Replicate 20.45644131339778
Replicate 30.4979725564381
Condition 2: 8 Hour
Replicate 12.6615070594832
Replicate 23.1596898253849
Replicate 32.9595017315848
Condition 3: 24 Hour
Replicate 14.4917448923769
Replicate 23.5959661234637
Replicate 34.5202868375114


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100963.p1 GENE.R_Transcript_100963~~R_Transcript_100963.p1 ORF type:complete len:92 (+),score=24.01 R_Transcript_100963:351-626(+)
ATGAATGCCAAGCTTCAAAGGTTGTATCGTAAAAATGTGTTCCCATCTGTTACTTGTTTAAGGCTCGACACAAAGAGCTCCCACATTGGGGTTTGGCAAAAGCAACAAGTGACTGGAGGCCAGTCCAAGTCTAGCTGGGTCATGACCATAGAGCTCAAGGCCCCGTCTCATGATCAGACCAAGGATAATATTGCTCATGTTAGTGAACCTCAAGATCAAGATGAAATTGATGAGCACAAAATTGCCTCGCAAATGGTTGAGGAGCTTCTAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100963.p1 GENE.R_Transcript_100963~~R_Transcript_100963.p1 ORF type:complete len:92 (+),score=24.01 R_Transcript_100963:351-626(+)
MNAKLQRLYRKNVFPSVTCLRLDTKSSHIGVWQKQQVTGGQSKSSWVMTIELKAPSHDQTKDNIAHVSEPQDQDEIDEHKIASQMVEELLS*

Click here to download the sequence:
Link to NCBI Protein BLAST