Transcript Information: R_Transcript_100965.p1


Annotated TAIR IDAT1G15360.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)SHN1, WIN1
Annotation TypeHomolog
Chromosome Positionchr1:5283609-5284506 | Forward length=199
E-Value2E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62226003254723
Replicate 20.11929716145624
Replicate 30.13015191815996
Condition 2: 8 Hour
Replicate 11.391242326548
Replicate 21.7787065100943
Replicate 32.578353781305
Condition 3: 24 Hour
Replicate 13.5219363360682
Replicate 25.3885007516751
Replicate 32.8603250443104


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100965.p1 GENE.R_Transcript_100965~~R_Transcript_100965.p1 ORF type:complete len:176 (+),score=31.50,AP2|PF00847.16|1e-08 R_Transcript_100965:85-612(+)
ATGGTATGCTCAGGTAAGAGGTTCAGAGGTGTCAGGCAACGCCAAGGCGTTTGGGTTGCTGAAATTCGTCACCCCATTTTGAAGAGAAGATTATGGCTTGGAACATTCAAGACAGTAGAAGCAGCAGCTAGAGCTTACGACGAGGCAGCCATCCTATTGAATGGCCGCAAAGCCAAGACCAATTTTCCGATCTTAACCAAGGAATCATCAGACTACACATCAACATCATCATCAAATTCTTTGTCGTCGATTATGAATGCCAAGCTTCAAAAGTTGTATCATAAAAATGTCTTCCCATCGGTTACTTGTCTAAGGCTGGACACAAAGAGCTCTCACATTGGGGTTTGGCAAAAGCAACAAGTGACTGGAGGCCAGTCCAAGTCTAGCTGGGTCATGACCATAGAGCTCAAGGCCCCGTCTCATGATCAGACCACGGATAATATTGTTCATGTTAGTGCGCCTCAAGATCAAGATGAAATTGATGAGCACAAAATTGCCTCGCAAATGGTTGAGGAGCTTCTAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100965.p1 GENE.R_Transcript_100965~~R_Transcript_100965.p1 ORF type:complete len:176 (+),score=31.50,AP2|PF00847.16|1e-08 R_Transcript_100965:85-612(+)
MVCSGKRFRGVRQRQGVWVAEIRHPILKRRLWLGTFKTVEAAARAYDEAAILLNGRKAKTNFPILTKESSDYTSTSSSNSLSSIMNAKLQKLYHKNVFPSVTCLRLDTKSSHIGVWQKQQVTGGQSKSSWVMTIELKAPSHDQTTDNIVHVSAPQDQDEIDEHKIASQMVEELLS*

Click here to download the sequence:
Link to NCBI Protein BLAST