Transcript Information: R_Transcript_100980.p1


Annotated TAIR IDAT1G06060.1
Annotated Gene NameLisH and RanBPM domains containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:1833071-1834516 | Forward length=213
E-Value2E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5039286160492
Replicate 26.27475644625
Replicate 34.2127333510165
Condition 2: 8 Hour
Replicate 15.9103811941626
Replicate 26.8110732044991
Replicate 35.8418976709291
Condition 3: 24 Hour
Replicate 13.8263012046174
Replicate 24.5631570118436
Replicate 35.2832390623545


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_100980.p1 GENE.R_Transcript_100980~~R_Transcript_100980.p1 ORF type:complete len:174 (+),score=41.15,CLTH|PF10607.5|1.1e-16 R_Transcript_100980:310-831(+)
ATGGATTTGGATCCCAGACACTACGATACTGTTGTTGTTAGTGAAAATGATACCCACAACATTGTGCTATCATATCTTATTCATAATTGCTTCAAAGAGACCGTGGAATCCTTCGTTGGCTGTACAGGGATAAAACAGCCTGCTGGTTGTCTTGAGGATATGGATAGAAGAATAAAAAACTCCTGTGGCAGCGCAGAAGCTCTTGACTTTGCTCAGAGGAAGCTGACTCCTTTTGGACAGGTGCAAAAATATGTGGAGAAACTTGAGGATTTCATGGCTTTGCTCGCTTATGAGGAGCCAGAAAAGTCACCAATGTTTCATCTCTTGAGCCTAGATTATAGACAAGATGTTGCTGATAACTTAAATCGAGCAATTTTAGTCCATGCCAATCAGCCAAGCTATTCATCCTTGGAAAGGTTGATTCAGCAGACTGCAGTTGTTGGTCAGCACTTGAATCAGGAACATGGCAAGGAAGGTCGTCCTCCATTTTCTTTGAAGGATTTCATCAGTGGTAGAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_100980.p1 GENE.R_Transcript_100980~~R_Transcript_100980.p1 ORF type:complete len:174 (+),score=41.15,CLTH|PF10607.5|1.1e-16 R_Transcript_100980:310-831(+)
MDLDPRHYDTVVVSENDTHNIVLSYLIHNCFKETVESFVGCTGIKQPAGCLEDMDRRIKNSCGSAEALDFAQRKLTPFGQVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLDYRQDVADNLNRAILVHANQPSYSSLERLIQQTAVVGQHLNQEHGKEGRPPFSLKDFISGRN*

Click here to download the sequence:
Link to NCBI Protein BLAST