Transcript Information: R_Transcript_101087.p1


Annotated TAIR IDAT3G13160.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4229994-4231178 | Reverse length=394
E-Value7E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9046282454682
Replicate 21.6234252899199
Replicate 33.1290131252476
Condition 2: 8 Hour
Replicate 12.7767475713371
Replicate 22.0747209955739
Replicate 34.5379026550967
Condition 3: 24 Hour
Replicate 14.4377204692727
Replicate 25.3432843703976
Replicate 35.8668074418488


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_101087.p1 GENE.R_Transcript_101087~~R_Transcript_101087.p1 ORF type:complete len:388 (+),score=74.67,PPR_2|PF13041.2|2.4e-05,PPR_2|PF13041.2|3e-08,PPR_2|PF13041.2|1.7e-15,PPR_2|PF13041.2|5.3e-10,PPR_2|PF13041.2|5.7e-13,PPR_2|PF13041.2|0.00014,PPR_1|PF12854.3|0.0047,PPR_1|PF12854.3|8.7e-11,PPR_1|PF12854.3|0.00065,PPR_1|PF12854.3|0.039,PPR_1|PF12854.3|0.00046,PPR_1|PF12854.3|79,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|0.27,PPR|PF01535.16|2.3e-07,PPR|PF01535.16|0.00019,PPR|PF01535.16|0.073,PPR|PF01535.16|0.068,PPR|PF01535.16|1.4e+04,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|0.082,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|0.00042,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|7.4e+02,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1e+04 R_Transcript_101087:84-1247(+)
ATGGCAGCAATGAAGCTAAGCAAAATGCACCCAATCAATTACCTCATACGCCGTTCATTCTCTACATCAACCCCATCTTCTTCAGTTTCACACAAGATATACAAAGAACCAGACCTCAGAACTCTCGTCGAGACCTTCAAAACATACTCAAAGCAAGACAAGTTCCGTCAAAGAGCCACCTTCTACGAGCTAACTGTTCGACGTTTAGCCAACGCCAAACGCTTTGACTGGGTCCATGAGATCCTCGATGATCAAAAGAAGTACAAGGACATTACAACTGAAGGCTTTGCCAATCGTCTCATCTCCTTGTATGGGAAATCCGGCATGTTTGATCATGCACACCAATTGTTCGACGAAATGCCTCAACTAAAATGTGCCAGAACTGTCAAGTCCCTGAATGCCCTTTTGGGGGCTTGTGTTAGTACCAAGAAATTTGATAAGGTTGAGGGGTTTTTCAAGGAGTTGCCTTTGAAGTTGGGTGTCAAGCCTGATGTTGTGTCTTATAATACTGTGATCAGAGGTTTTTGTGAGATGGGTTGTTTTGATAGTGCTGTTTTGATGCTTGGTGAGATGGAGAAGGAGGGCTTGTGTCCTAATTTGATTACTTTCAATACCCTCTTCAATGGGTTGTATAAGAAAGGAAGGTTTTTAGAGGGTGAGAAAATTTGGGGTATGATGGAAAAATATAATGTAGTTCCTGATAACATAAGTTATAATATGAAGTTACATGGGTTGGTTTCGGATAAGAAAGGACGCGAAGCTGTCGAGTTAGTTGAAGAAATGAAAACAAAGGAGTTGAAGCTTGATGTGTTCACTTTTAATACCTTGTTCAAAGGGTTATGTGATGAGGGGGAAAGTAGTGTAGAGGAAGCTAAAAAATGGTACAAGGAAATGATGAAAACCAAGTGTACGCCTAACCGGCTGACTTATGCTATGTTGCTGACACTGGCTTGTGACAAGGAGGATTTTCTGTTTGGTGATCAGTTGTGTAGGGGGATGTTTTATTGTAAGTGTGAGTTGAATGAAGGCGTTTTGGTGCAGAAGGTGGTGGATGGGTTAGCGAAGCAGTCAGAAACTGCGAAAGCACAAGTTCTGGTTCGACTTGCCAAGAAGAGTAAACACTCTTGTTATCATGGGATTCAAATGCCTCAGCTAGATAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_101087.p1 GENE.R_Transcript_101087~~R_Transcript_101087.p1 ORF type:complete len:388 (+),score=74.67,PPR_2|PF13041.2|2.4e-05,PPR_2|PF13041.2|3e-08,PPR_2|PF13041.2|1.7e-15,PPR_2|PF13041.2|5.3e-10,PPR_2|PF13041.2|5.7e-13,PPR_2|PF13041.2|0.00014,PPR_1|PF12854.3|0.0047,PPR_1|PF12854.3|8.7e-11,PPR_1|PF12854.3|0.00065,PPR_1|PF12854.3|0.039,PPR_1|PF12854.3|0.00046,PPR_1|PF12854.3|79,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|0.27,PPR|PF01535.16|2.3e-07,PPR|PF01535.16|0.00019,PPR|PF01535.16|0.073,PPR|PF01535.16|0.068,PPR|PF01535.16|1.4e+04,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|0.082,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|0.00042,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|7.4e+02,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1e+04 R_Transcript_101087:84-1247(+)
MAAMKLSKMHPINYLIRRSFSTSTPSSSVSHKIYKEPDLRTLVETFKTYSKQDKFRQRATFYELTVRRLANAKRFDWVHEILDDQKKYKDITTEGFANRLISLYGKSGMFDHAHQLFDEMPQLKCARTVKSLNALLGACVSTKKFDKVEGFFKELPLKLGVKPDVVSYNTVIRGFCEMGCFDSAVLMLGEMEKEGLCPNLITFNTLFNGLYKKGRFLEGEKIWGMMEKYNVVPDNISYNMKLHGLVSDKKGREAVELVEEMKTKELKLDVFTFNTLFKGLCDEGESSVEEAKKWYKEMMKTKCTPNRLTYAMLLTLACDKEDFLFGDQLCRGMFYCKCELNEGVLVQKVVDGLAKQSETAKAQVLVRLAKKSKHSCYHGIQMPQLDN*

Click here to download the sequence:
Link to NCBI Protein BLAST