Transcript Information: R_Transcript_101112.p1


Annotated TAIR IDAT5G26910.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58650.1); Has 1322 Blast hits to 684 proteins in 162 species: Archae - 4; Bacteria - 497; Metazoa - 157; Fungi - 101; Plants - 155; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9466169-9469523 | Reverse length=853
E-Value3E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1685862546341
Replicate 24.8379670652764
Replicate 35.6161808408274
Condition 2: 8 Hour
Replicate 15.2251334961204
Replicate 26.7260314278254
Replicate 36.9639550393766
Condition 3: 24 Hour
Replicate 17.8176415077312
Replicate 25.6327278664925
Replicate 38.2979493364628


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_101112.p1 GENE.R_Transcript_101112~~R_Transcript_101112.p1 ORF type:complete len:881 (+),score=197.66,DUF4378|PF14309.2|4.2e-22,VARLMGL|PF14383.2|6.3e-15 R_Transcript_101112:450-3092(+)
ATGGCAACTGAGAAAAAACGCTCGAAGGGCTTTCTCTACTTGTTTGATTGGAATGCTAAATCGAAGAAAAAGTTGTTCTCAAACAAGTCTGAATCATCCGAAGGATCTAATCATGGGAGGGAAAATGTTGATAATTTGGTGATTTCTCAGTATCTCTTGAGGGAGTTTCAAGAGAACGGAGATCATCTTTCTTTCCGAGGAACTGGTAGCTATAGTTGTGCATCATCTGTAAATGGTGATGAAGGATATGAAACAAAAGCCCCTGGGGTTGTTGCCCGACTTATGGGATTGGACTCTATGCCAACTACTTCTTGTGAGGCAAGTTCCGTTTCTTCCTATGATTCTCGTGCTCTTAGCAATTCATATTATCCTAGGGGTTCTGCTCCATTCCAGCATGAGCATCATGTTCTGGACTACAACTATGCACCTCACAAACTGGAGGGGTTCCCTTGGAGCCCTAAGGATTCAAGAGCAAACAAGGTTCATGGTCGGCCAATCGAGAGGTTTCAGACTGAGGTATTGCCTCCAAAGTCAGCAAAACCAATATCAATTACTCACCACAAACTCTTATCTCCAATCAAGAGCCCAGGGTTTGTCCCTACAAAGGATGCTGCTTATGTAATGGAGGCAGCTGCAAGGATCATCGATGCTTCTCCTCAGCCTAGTGGCAGGGTTAAAATTCCATCTCTTGGGTCTCCTTCATCTTCATTTAGGCTTCAAGATCTAAAAGACAGAATGGATGCTGCACAGAGATCATCCAGGCTACCCGAGTCCTCCAAGACCCCAAAGGATTCTGTCACTATGCAGCAAATGAGGGAAAGCTCCTCCGAGAGGTCTAGTAATAGGTCCTTGTTCAAAAATATTATAGGTTCGGAAAAAAGCAGTTTGCCGAAAGCAAAGAATAAAGGAAAATCGGTTTCTGTACCCATCAGAGAAAAGACCAACATGCAGAGGAAAGAAGGTTCAGCATATAGTGACAACAGGAATCAACAGAAGGAGTCTAAGAAAGTGAAGCTGAAGCAAAAGCAACCCAATACGCAGAAAGCCGGGCAGGTTAGGACTTCTAGGAACAAGACTTCTGGTGTGCTCAGACAGAACAATGATAAGCAGAATAGTGTCTCTCACAAAGATAAATCAACAATAAAAGCTTCAGTCTCTGACCAGAAACCTAGAAAAGTCTCTTCAGGGGGTAACTCTGCCGGTCCCAGTAAAATCGTTAACAAAGTTTTTGTGAACACAGAAAATGTATCAAACAAGCTAGTCACTACAACTAATGCTATTGACAAGAGAGCCCCATCAGATGGTGCTACTGAAAAGAGGCCTTCATTAAACAGAATGAAAAATATCTCCAGAAGCAAGCAGTTTGCTTCCAGAGATAATCGGTTAGTTGAGAATGTGCCTGACATCAGTGATCAAAGAGCTCTACAATGCGATCAGTCACATATAAGTGATTCCAGGAAGGACATGGATGTAATCTCATTCACTTTTACTTCCCCAATAAAGAAATCTGGAACTCAGTCATCATCATATGCTGAAGCCATTGGAGGCAATAATTGTCATCTTGGTGCTGATTCTCAAGATACCAACTGTCAATCACATGCAAGAAGTTCATTGTCACCTCCGTTGGGCTTGAGCCTTGTCGACAGTGGCTCTTTGAGTCTTCTTTTGGAGCAGAAGCTCAAGGAATTAACTGATAAACTTGTGTCAAACAAATCTGACTGGGTGACAGACGACCCTGATCCTGACTCTGTATCTTGTTTGTCTGAACCAATATCTTCACATGATGTTTTGGGCACTGCTTCCATGGAATATGATGAATCATCTTATAACGAACAAACAAGTACTGCATGTGATGATGATTGCTCGTCGTCTTTGGTAACAAAATCTAGACGAAAGTGTGAGGATCGTGGGGGTATCGAAGAGCATGGTGTTAGTGACATTAGCAAAGGTGAAATCAGCAGAGGATCTGATCTTGGATATCTCAACATCTCTCAATCTGAATGTTCTATCTCAGGAAGTTGCTTGTCATCAAATGCTACGAGTGACGTCACTTGTGGATATGATCAGCCTTTATCCCCTCACTCTCAAGAAGTGACAAGTAGCTTGTCTACTGAAAGTGTCCATCCAAGAGGAGATGAGGCAGATTCGACTGATGTGGCATCTTATTGGGAATTTGAATACGTGAGACATGTGCTTCATTATGCAGGGTTATATAGATTTGGGTTGCAAATGGACTGCAAGCTCATAGATTCTGGTGTGTTTGATCTGTTGGAAAGTCTGATAAATACCTCTGGTAGAAATGCAGAATTATGTCCCAAGCTTGAACGGAGAATCTTGTTCGATTCTGTCGCTGAAATGGTTAGCTCGAGATACGAACGGGTTCTTCTTGGAAGTCGGAAAGGATGGACTAAGTGGGGAATGTTACTTGAAAATGAGTGCTTAACTGAGGACATATACAAGGAAATTTTATGCTTGCAAAGTCTGGGAAATTTGATGGTCGATGAGCTTGTGGACAGGGATATGAGTACTCAGTGTGGGAGGTGGCTGGACTTCGAAATGGAATCCCTAGAAGAGGGCATGGAGATTGAAAAGGAGATACTTGCATCTTTGGTTGATGAGCTGGTTGCTGATTTGTCTATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_101112.p1 GENE.R_Transcript_101112~~R_Transcript_101112.p1 ORF type:complete len:881 (+),score=197.66,DUF4378|PF14309.2|4.2e-22,VARLMGL|PF14383.2|6.3e-15 R_Transcript_101112:450-3092(+)
MATEKKRSKGFLYLFDWNAKSKKKLFSNKSESSEGSNHGRENVDNLVISQYLLREFQENGDHLSFRGTGSYSCASSVNGDEGYETKAPGVVARLMGLDSMPTTSCEASSVSSYDSRALSNSYYPRGSAPFQHEHHVLDYNYAPHKLEGFPWSPKDSRANKVHGRPIERFQTEVLPPKSAKPISITHHKLLSPIKSPGFVPTKDAAYVMEAAARIIDASPQPSGRVKIPSLGSPSSSFRLQDLKDRMDAAQRSSRLPESSKTPKDSVTMQQMRESSSERSSNRSLFKNIIGSEKSSLPKAKNKGKSVSVPIREKTNMQRKEGSAYSDNRNQQKESKKVKLKQKQPNTQKAGQVRTSRNKTSGVLRQNNDKQNSVSHKDKSTIKASVSDQKPRKVSSGGNSAGPSKIVNKVFVNTENVSNKLVTTTNAIDKRAPSDGATEKRPSLNRMKNISRSKQFASRDNRLVENVPDISDQRALQCDQSHISDSRKDMDVISFTFTSPIKKSGTQSSSYAEAIGGNNCHLGADSQDTNCQSHARSSLSPPLGLSLVDSGSLSLLLEQKLKELTDKLVSNKSDWVTDDPDPDSVSCLSEPISSHDVLGTASMEYDESSYNEQTSTACDDDCSSSLVTKSRRKCEDRGGIEEHGVSDISKGEISRGSDLGYLNISQSECSISGSCLSSNATSDVTCGYDQPLSPHSQEVTSSLSTESVHPRGDEADSTDVASYWEFEYVRHVLHYAGLYRFGLQMDCKLIDSGVFDLLESLINTSGRNAELCPKLERRILFDSVAEMVSSRYERVLLGSRKGWTKWGMLLENECLTEDIYKEILCLQSLGNLMVDELVDRDMSTQCGRWLDFEMESLEEGMEIEKEILASLVDELVADLSI*

Click here to download the sequence:
Link to NCBI Protein BLAST