Transcript Information: R_Transcript_101131.p1


Annotated TAIR IDAT2G40435.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16887048-16888407 | Forward length=158
E-Value2E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.530893499428
Replicate 21.0836800214864
Replicate 31.1822832307692
Condition 2: 8 Hour
Replicate 10.31594664448058
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 11.3330339680602
Replicate 21.8497959069516
Replicate 31.8357429737398


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_101131.p1 GENE.R_Transcript_101131~~R_Transcript_101131.p1 ORF type:complete len:155 (+),score=33.12 R_Transcript_101131:150-614(+)
ATGTTGCCAAAGAAGAATCACCATAATAAAGCTTCTTTGGATCACAAGTACCACCAACTTCGTTCTGCCACCAATTCTAATGCCGTTAACAAGGCGTCGATATTGGTAGACGCTTCGAAATACATACAAGAGCTCAAGGGAAAAGTTGAAAGGCTCAATCAAGAAATGAGTACTAGTAGTAGTAGTAGTTCTAGTACTAATATTGAGGCTTGTTGTGCTTCAACTACTAGTACAACTAACGATGATGGGGATGATCAAACACCTATACCTAAGGTGAATGTGGAAACTCGAGAGAAAGGGTTCTTAATAAACGTTTATTCAGAGAGAAATTGCCCTGGCTTGTTGGTGTCAATTCTCGAAGCATTTGAAGAGCTGGGTCTTGAAGTGCTTGATGCTAGGGTTTCCTGTGCTGATTGCTTTCAGCTTGAAGCCGTTGGTGAAGAGGAGCATGTGGGTGATACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_101131.p1 GENE.R_Transcript_101131~~R_Transcript_101131.p1 ORF type:complete len:155 (+),score=33.12 R_Transcript_101131:150-614(+)
MLPKKNHHNKASLDHKYHQLRSATNSNAVNKASILVDASKYIQELKGKVERLNQEMSTSSSSSSSTNIEACCASTTSTTNDDGDDQTPIPKVNVETREKGFLINVYSERNCPGLLVSILEAFEELGLEVLDARVSCADCFQLEAVGEEEHVGDT*

Click here to download the sequence:
Link to NCBI Protein BLAST