Transcript Information: R_Transcript_101168.p1


Annotated TAIR IDAT5G51980.2
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21113650-21115902 | Reverse length=443
E-Value6.4E-210
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.941664032535
Replicate 217.324301688784
Replicate 321.879529632199
Condition 2: 8 Hour
Replicate 118.50165131664
Replicate 218.249688318815
Replicate 325.843660860865
Condition 3: 24 Hour
Replicate 125.274177912114
Replicate 220.027757512744
Replicate 323.850727528772


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_101168.p1 GENE.R_Transcript_101168~~R_Transcript_101168.p1 ORF type:complete len:446 (+),score=58.16,WD40|PF00400.28|0.00072,WD40|PF00400.28|1.6e+03,WD40|PF00400.28|0.0069,WD40|PF00400.28|0.00095,WD40|PF00400.28|2.7,WD40|PF00400.28|37,Nup160|PF11715.4|1.4,Nup160|PF11715.4|0.0014,Nup160|PF11715.4|8.4,Nup160|PF11715.4|2.8e+02,zf-CCCH|PF00642.20|9.7e+02,zf-CCCH|PF00642.20|6e-07,zf-CCCH_3|PF15663.1|0.03,zf-CCCH_3|PF15663.1|0.19 R_Transcript_101168:441-1778(+)
ATGGACTTCGATTCAACAGGAGGAGGAAGTAAACGAGTATTCCATAGACTAGGGCCTTCTTCAAACCCCCAGCACCAGGTCCAACACAACAAACCCCAACACCAAAAAGTATGTTACCATTGGCAAGCAGGTAGATGCAGTAGATTCCCCTGCCCTTTTCTTCACAGAGAACTCCCCCCACCAAACCCACATCACCACCCTTCTACTTCTTCCAATCAAAATAATGGGTCCTCCAAGAGACCTCACAGTTTAGGTGGGGCCGGCTCCGATGAGGGGTTTTCGATGCGTAAAAGCCCTAATTTCAACAACACTTGGGGTAGACATACCAGTGGTGGGGGTGGTCCACCTAAGAAGATGGAGAAAGTTTGTAATTATTGGGTTCAAGGGACTTGTAATTATGGTGATAAGTGTAAATTTTTGCACACTTGGTCTATCGGTGATTCGTTCTCTCTCTTGACCACCCTTGAAGGCCACCAGAAGGTTGTAACTGGGATCGCTTTGCCAGCAGGGAAGGATAAGCTTTATAGTGGCAGTAAAGATGAGAATGTCAGAATTTGGGACTGCCAATCTGGACAGTGTGTAAATGCTATTCCTCTGGGAGGAGAAATTGGCTGCATGATCAGTGAAGGACCATGGGTTTTTATTGGCTTACCAAATATGGTCAAGGCATGGAATGTTGAGACAGTCACTGATATGAGTCTCAGTGGACCTGTTGGACAAGTTTATGCCCTGGTGGTGGGGAACGATATGCTCTTTGCTGGTACTCAGGATGGGGCTATATTGGCGTGGAAATTCAATCCAATAAGTAATTGCTTTGAACCAGCTGCATCATTGACGGGGCATACTCGTGCTGTTGTTACAATGGTTGTTGGAGGAGCTAATAGACTGTATTCGGGTTCAATGGACAATTCTATAAGAGTGTGGAATCTCGAAACATTGCAATGCATGCAGACTTTGACGGATCATACTTCCGTAGTCATGTCTGTCCTTTGTTGGGACCAGTTCCTGCTATCAGCTTCGCTGGACAAGACGATAAAGGTGTGGGTTGCTACTCAGAGTGGGAACTTGGAAGTGACCTATACTCACACTGAAGAGCATGGCATTCTCACTCTATGCGGGATGTGTGATTTGGAAGGGAAGCCGTTCTTACTCTGTGCCTGTAATGACAATACTGTCCGCGTATATGACTTGCCATCGTTTATGGAGAGGGGCAAGATCTTTTCAAAGCAGGAGATCCGAGCTGTTGAAACAGGTCCTGGTGGACTATTTTTCACTGGAGACGGAAATGGTCAGGTGAGGGTATGGCAATGTTCATCAGCATCGAAGACTACCGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_101168.p1 GENE.R_Transcript_101168~~R_Transcript_101168.p1 ORF type:complete len:446 (+),score=58.16,WD40|PF00400.28|0.00072,WD40|PF00400.28|1.6e+03,WD40|PF00400.28|0.0069,WD40|PF00400.28|0.00095,WD40|PF00400.28|2.7,WD40|PF00400.28|37,Nup160|PF11715.4|1.4,Nup160|PF11715.4|0.0014,Nup160|PF11715.4|8.4,Nup160|PF11715.4|2.8e+02,zf-CCCH|PF00642.20|9.7e+02,zf-CCCH|PF00642.20|6e-07,zf-CCCH_3|PF15663.1|0.03,zf-CCCH_3|PF15663.1|0.19 R_Transcript_101168:441-1778(+)
MDFDSTGGGSKRVFHRLGPSSNPQHQVQHNKPQHQKVCYHWQAGRCSRFPCPFLHRELPPPNPHHHPSTSSNQNNGSSKRPHSLGGAGSDEGFSMRKSPNFNNTWGRHTSGGGGPPKKMEKVCNYWVQGTCNYGDKCKFLHTWSIGDSFSLLTTLEGHQKVVTGIALPAGKDKLYSGSKDENVRIWDCQSGQCVNAIPLGGEIGCMISEGPWVFIGLPNMVKAWNVETVTDMSLSGPVGQVYALVVGNDMLFAGTQDGAILAWKFNPISNCFEPAASLTGHTRAVVTMVVGGANRLYSGSMDNSIRVWNLETLQCMQTLTDHTSVVMSVLCWDQFLLSASLDKTIKVWVATQSGNLEVTYTHTEEHGILTLCGMCDLEGKPFLLCACNDNTVRVYDLPSFMERGKIFSKQEIRAVETGPGGLFFTGDGNGQVRVWQCSSASKTTV*

Click here to download the sequence:
Link to NCBI Protein BLAST