Transcript Information: R_Transcript_101274.p1


Annotated TAIR IDAT3G06350.1
Annotated Gene Namedehydroquinate dehydratase, putative / shikimate dehydrogenase, putative
Annotated Gene Symbol(s)EMB3004, MEE32
Annotation TypeOrtholog
Chromosome Positionchr3:1924536-1927701 | Reverse length=603
E-Value4.6E-271
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 145.080899667892
Replicate 235.157547870565
Replicate 339.42816627174
Condition 2: 8 Hour
Replicate 136.752662786314
Replicate 240.275740392311
Replicate 350.279607585906
Condition 3: 24 Hour
Replicate 148.287473681662
Replicate 251.376285329902
Replicate 342.708757098605


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_101274.p1 GENE.R_Transcript_101274~~R_Transcript_101274.p1 ORF type:complete len:513 (+),score=119.90,DHquinase_I|PF01487.11|1.9e-66,Shikimate_dh_N|PF08501.7|1.9e-26,Shikimate_DH|PF01488.16|4.4e+03,Shikimate_DH|PF01488.16|1.2e-07,Sacchrp_dh_NADP|PF03435.14|0.46,Sacchrp_dh_NADP|PF03435.14|3.5e+03,Sacchrp_dh_NADP|PF03435.14|0.072 R_Transcript_101274:250-1788(+)
ATGAAGGGATTAACTCTAATCTGTGAAACAGTTATGGCTGCCACTGTTGATGAGATGGTCAGTCTGATGGTTAAAGCTAAGGAGTTTGGAGCAGATCTTGTTGAAGTTCGGTTGGATTACTTGGCTAATTTTGATCCTCATTCAGATGTCACCTCTTTGATCAAACGCTCTCCTTTGCCTACCCTCTTTACCTACAGACCTAAATGGGAAGGTGGACAGTATGAGGGTGATGAAGCCAAGCGGTTGGATGTGTTACGATTAGCTATTGAGCAAGGAGCTGATTACGTGGACATTGAATTACAGCGTGCAGATGAATTTAATAAATCCATAGAAGGGAAGAAGCCTGAAAAGTGCAAAGTCATAGTCTCATCTCATAACTATCAAAATACACCAGCAACTGAAGATCTTGGAAATCTTGTTGCCAAAATACAATCTACTGGAGCTGATATAGTGAAGATTGCCACAACTGCCGTAGATGTGACTGATGTTGCCCGAATGTTCCAAATAACAGCAAATTCTCAAGTTCCAGTGATAGGACTTGTTATGGGTGAAAGGGGCTTAATTTCACGACTTCTTTGTCCTAAATTTGGTGGATACCTTACCTTTGGGACGATTGAGCCCGGAAAAGTTTCAGCTCCTGGGCAGCCGACATTGAAAGAGCTCGTGGATTTGTACAATTTTAGACAGATTGTACCAGACACTAAAATATTTGGAATCATTGGGAAGCCAGTGAGTCACAGCAAATCCCCCCTCATATATAATGAAGCATTCAAGTCTGTTGGCTTCAATGGAGTTTATGTTCCATTTTTGGTGGACAATGTTCAAAATTTCTTCTCGACATACTCATCTGCAGATTTTGCTGGATTCAGCTGTACAATTCCACACAAGGAGGCTGCTTTTCAGTGCTGCGATGAGGTTGATCCTGTTGTCAAGTCAATAGGGGCTGTCAACTGCTTAATCAAGAGAGCAAATGATGGGAAATTAATGGGTTACAATACGGACTATATTGGTGCCATAACTGCCATTGAAAATGCATTAAGAGGAGCAAATATCAATGACATGGAAACAGGTTCACCCTTAGCAGGAAAGCTGTTTGTCGTTGTTGGGGCTGGTGGCGCTGGCAAAGCACTGGCTTTTGGTGCAAAAGAGAAAGGAGCTAGAGTTGTAGTTGCCAATCGCACTTATGACCGAGCTAGAGAGCTAGCAAATGCTATAGGAGGAGATGCTGTTTCTCTAGCAGAGCTGGGGAGCTTCTATCCTGAAGATGGCATGATTCTTGCAAATACAACATCCATTGGGATGCAGCCTGGGGTGGATGAGACCCCTGTTCCAAAGGATGTTCTAAAGCATTATACCCTGGTCTTTGATGCTGTATACACTCCTAAGATAACCAGATTATTGAAGGAAGCAGAACAAGCTGGAAGTATTGTTGTTAGCGGGCTGGAGATGTTCATGGGGCAGGCATACGAACAATATGAGAGATTCACTGGATTGCCTGCACCAAAGGAACTATTTAGGAATGTGTTGGCAGATCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_101274.p1 GENE.R_Transcript_101274~~R_Transcript_101274.p1 ORF type:complete len:513 (+),score=119.90,DHquinase_I|PF01487.11|1.9e-66,Shikimate_dh_N|PF08501.7|1.9e-26,Shikimate_DH|PF01488.16|4.4e+03,Shikimate_DH|PF01488.16|1.2e-07,Sacchrp_dh_NADP|PF03435.14|0.46,Sacchrp_dh_NADP|PF03435.14|3.5e+03,Sacchrp_dh_NADP|PF03435.14|0.072 R_Transcript_101274:250-1788(+)
MKGLTLICETVMAATVDEMVSLMVKAKEFGADLVEVRLDYLANFDPHSDVTSLIKRSPLPTLFTYRPKWEGGQYEGDEAKRLDVLRLAIEQGADYVDIELQRADEFNKSIEGKKPEKCKVIVSSHNYQNTPATEDLGNLVAKIQSTGADIVKIATTAVDVTDVARMFQITANSQVPVIGLVMGERGLISRLLCPKFGGYLTFGTIEPGKVSAPGQPTLKELVDLYNFRQIVPDTKIFGIIGKPVSHSKSPLIYNEAFKSVGFNGVYVPFLVDNVQNFFSTYSSADFAGFSCTIPHKEAAFQCCDEVDPVVKSIGAVNCLIKRANDGKLMGYNTDYIGAITAIENALRGANINDMETGSPLAGKLFVVVGAGGAGKALAFGAKEKGARVVVANRTYDRARELANAIGGDAVSLAELGSFYPEDGMILANTTSIGMQPGVDETPVPKDVLKHYTLVFDAVYTPKITRLLKEAEQAGSIVVSGLEMFMGQAYEQYERFTGLPAPKELFRNVLADH*

Click here to download the sequence:
Link to NCBI Protein BLAST