Transcript Information: R_Transcript_101283.p1


Annotated TAIR IDAT2G38570.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: PRC-barrel-like (InterPro:IPR011033); Has 300 Blast hits to 300 proteins in 81 species: Archae - 0; Bacteria - 135; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16136854-16138417 | Reverse length=328
E-Value1.7E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0261246751246
Replicate 26.8994935174124
Replicate 39.0977113857059
Condition 2: 8 Hour
Replicate 15.6149619382572
Replicate 28.4580167720797
Replicate 38.8827030695511
Condition 3: 24 Hour
Replicate 19.6607321194594
Replicate 27.768873699045
Replicate 38.0720613029692


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_101283.p1 GENE.R_Transcript_101283~~R_Transcript_101283.p1 ORF type:5prime_partial len:423 (+),score=77.20 R_Transcript_101283:1-1269(+)
CGGGGGACCACCTTGGCATTGCACAGTTTGTTAGACAAGCTACTAGAGCTGATTTCAAGCATGTGTGACTGTGTGCAATCCTCCATTAATATGTCGTATGTTGGCGCCAAATCTCGAAAATTAAGGCTATCACCAAGTAATTATTCGAACCCACTTTCTGGGGTAGTAAGAGATTGTTTAGCTAGGAATCTAAACAGCGTAAATAATGTCATATGTGTTAGGGTTCTTAGGAAGAAAGACAAACCTTTGATGAATCATATCCATAGGGTTTGTACAGATGTGGGTGTATTTGGCTCAAATGAGGGAAGTGATGAGCAATTTGAGGTGGGTTTGCAAAATGGTGAAGGAAAGTTGAGAGATTCCATTAGAAAAAATGAAGTTGATGATATGGGTGGTATTGATATTAATACCTTGAAAAGAGAGAAACAGCATGATGATGGTTTTGGGATGTTGAATTCTGAGGTTTTGCAAGAGAAATTTGAGGGTTTGAAGGAGGATAAGGTAGGTTTAAAGGGTGAAAAATTGGTTGGTATTGGGAATGAGAAAAGTGAGGGTTTGAAACAGGAGCTATTGCTTCAGCCAAAGGGGAAGCAATTGATCAAGAGAACGAGCGTGCTCGCGAAACAGGTGATTGGGATTCAATCTGCTCTGAGTTTCGGATTCGTGTCTCAACTTTGGATTGATACTAGCACTTGGGTGGTTCTTGAAGTAGAAGTGAGGCCAAACTTGCTTTCCTCCGAGTCAGGAAAATTTCTTCTTAAGGATATCAAACAGGTTGGTGATGTGGTGCTTGTCCAGGACGAGAGTGTCATGCTGAATGAATTTAGAACAGTTGGACTGGAAACCCTGGTAGGATACAATGTTGTGACACCTAGGCAAAGAAATTTGGGAAAGGTTCGTGGTTACAACTTCAATATCAACTCTGGAGCTGTCCATTCTCTTGAGCTTGATGCATTTGGATATTCAATAATTCCATCAAGTTTGGTCACTACGTATGCCTTGTTTACTGAAGATGTAGTAGCAGTTGTATCTGACACAATCGTAGTGCATGAAGCAGCTGCCTCACGTATCCAGAGATTAACGAAGGGCCTCTTAGGAACGAAGAACATGGAGTCCTCAAACTCTGACCGTAAGTATCGGGACCTGGAAGAAGAGTACACACGACCTGTTAAAGGTGGCAAATCGAGAAAAAAATCCAGTAAGCGGAAATTCTACCCTGGAACGAGAGATCTCGACGATGATATGGAGCTTCCTATGGATTACATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_101283.p1 GENE.R_Transcript_101283~~R_Transcript_101283.p1 ORF type:5prime_partial len:423 (+),score=77.20 R_Transcript_101283:1-1269(+)
RGTTLALHSLLDKLLELISSMCDCVQSSINMSYVGAKSRKLRLSPSNYSNPLSGVVRDCLARNLNSVNNVICVRVLRKKDKPLMNHIHRVCTDVGVFGSNEGSDEQFEVGLQNGEGKLRDSIRKNEVDDMGGIDINTLKREKQHDDGFGMLNSEVLQEKFEGLKEDKVGLKGEKLVGIGNEKSEGLKQELLLQPKGKQLIKRTSVLAKQVIGIQSALSFGFVSQLWIDTSTWVVLEVEVRPNLLSSESGKFLLKDIKQVGDVVLVQDESVMLNEFRTVGLETLVGYNVVTPRQRNLGKVRGYNFNINSGAVHSLELDAFGYSIIPSSLVTTYALFTEDVVAVVSDTIVVHEAAASRIQRLTKGLLGTKNMESSNSDRKYRDLEEEYTRPVKGGKSRKKSSKRKFYPGTRDLDDDMELPMDYM*

Click here to download the sequence:
Link to NCBI Protein BLAST