Transcript Information: R_Transcript_101284.p1


Annotated TAIR IDAT2G38570.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: PRC-barrel-like (InterPro:IPR011033); Has 300 Blast hits to 300 proteins in 81 species: Archae - 0; Bacteria - 135; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16136854-16138417 | Reverse length=328
E-Value3E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50070466459328
Replicate 20.94247732541986
Replicate 30.97110857639549
Condition 2: 8 Hour
Replicate 11.2212401469948
Replicate 20.94796755935201
Replicate 31.3127099949906
Condition 3: 24 Hour
Replicate 10.80151945433381
Replicate 20
Replicate 30.32749682823288


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_101284.p1 GENE.R_Transcript_101284~~R_Transcript_101284.p1 ORF type:5prime_partial len:401 (+),score=76.28 R_Transcript_101284:1-1203(+)
CGGGGGACCACCTTGGCATTGCACAGTTTGTTAGACAAGCTACTAGAGCTGATTTCAAGCATGTGTGACTGTGTGCAATCCTCCATTAATATGTCGTATGTTGGCGCCAAATCTCGAAAATTAAGGCTATCACCAAGTAATTATTCGAACCCACTTTCTGGGGTAGTAAGAGATTGTTTAGCTAGGAATCTAAACAGCGTAAATAATGTCATATGTGTTAGGGTTCTTAGGAAGAAAGACAAACCTTTGATGAATCATATCCATAGGGTTTGTACAGATGTGGGTGTATTTGGCTCAAATGAGGGAAGTGATGAGCAATTTGAGGTGGGTTTGCAAAATGGTGAAGGAAAGTTGAGAGATTCCATTAGAAAAAATGAAGTTGATGATATGGGTGGTATTGATATTAATACCTTGAAAAGAGAGAAACAGCATGATGATGGTTTTGGGATGTTGAATTCTGAGGTTTTGCAAGAGAAATTTGAGGGTTTGAAGGAGGATAAGGTAGGTTTAAAGGGTGAAAAATTGGTTGGTATTGGGAATGAGAAAAGTGAGGGTTTGAAACAGGAGCTATTGCTTCAGCCAAAGGGGAAGCAATTGATCAAGAGAACGAGCGTGCTCGCGAAACAGTGGGTGGTTCTTGAAGTAGAAGTGAGGCCAAACTTGCTTTCCTCCGAGTCAGGAAAATTTCTTCTTAAGGATATCAAACAGGTTGGTGATGTGGTGCTTGTCCAGGACGAGAGTGTCATGCTGAATGAATTTAGAACAGTTGGACTGGAAACCCTGGTAGGATACAATGTTGTGACACCTAGGCAAAGAAATTTGGGAAAGGTTCGTGGTTACAACTTCAATATCAACTCTGGAGCTGTCCATTCTCTTGAGCTTGATGCATTTGGATATTCAATAATTCCATCAAGTTTGGTCACTACGTATGCCTTGTTTACTGAAGATGTAGTAGCAGTTGTATCTGACACAATCGTAGTGCATGAAGCAGCTGCCTCACGTATCCAGAGATTAACGAAGGGCCTCTTAGGAACGAAGAACATGGAGTCCTCAAACTCTGACCGTAAGTATCGGGACCTGGAAGAAGAGTACACACGACCTGTTAAAGGTGGCAAATCGAGAAAAAAATCCAGTAAGCGGAAATTCTACCCTGGAACGAGAGATCTCGACGATGATATGGAGCTTCCTATGGATTACATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_101284.p1 GENE.R_Transcript_101284~~R_Transcript_101284.p1 ORF type:5prime_partial len:401 (+),score=76.28 R_Transcript_101284:1-1203(+)
RGTTLALHSLLDKLLELISSMCDCVQSSINMSYVGAKSRKLRLSPSNYSNPLSGVVRDCLARNLNSVNNVICVRVLRKKDKPLMNHIHRVCTDVGVFGSNEGSDEQFEVGLQNGEGKLRDSIRKNEVDDMGGIDINTLKREKQHDDGFGMLNSEVLQEKFEGLKEDKVGLKGEKLVGIGNEKSEGLKQELLLQPKGKQLIKRTSVLAKQWVVLEVEVRPNLLSSESGKFLLKDIKQVGDVVLVQDESVMLNEFRTVGLETLVGYNVVTPRQRNLGKVRGYNFNINSGAVHSLELDAFGYSIIPSSLVTTYALFTEDVVAVVSDTIVVHEAAASRIQRLTKGLLGTKNMESSNSDRKYRDLEEEYTRPVKGGKSRKKSSKRKFYPGTRDLDDDMELPMDYM*

Click here to download the sequence:
Link to NCBI Protein BLAST