Transcript Information: R_Transcript_101311.p1


Annotated TAIR IDAT2G28780.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF939, bacterial (InterPro:IPR010343); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09450.1); Has 671 Blast hits to 667 proteins in 305 species: Archae - 0; Bacteria - 588; Metazoa - 0; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:12340099-12343281 | Reverse length=796
E-Value2.7E-253
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.757370728153
Replicate 213.258106159677
Replicate 329.15402966783
Condition 2: 8 Hour
Replicate 111.671395085419
Replicate 213.652774293697
Replicate 323.748728882939
Condition 3: 24 Hour
Replicate 137.031450724786
Replicate 241.617785818092
Replicate 354.826818005631


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_101311.p1 GENE.R_Transcript_101311~~R_Transcript_101311.p1 ORF type:complete len:814 (+),score=138.81,FUSC_2|PF13515.2|0.0018,FUSC_2|PF13515.2|2.4e-13,FUSC|PF04632.8|1.2e+03,FUSC|PF04632.8|5.4e-08,FUSC|PF04632.8|2e+03 R_Transcript_101311:180-2621(+)
ATGAGTAGTACTACTGGTAATATCGATAGTCTTAACGAGCAATCAAAGAGAACTCAAGCGATATGGAAATCAAGCCTAATATCAGCCTCAAGAACTGCATTAGCTTGCATTCTTGTGGGGTGTATAACTCTGTATGGCCCTGCCTCTTTGAAGGAACAAGTAGCTTTTCCAGCATTTTCTTATGTCACAGTCGTTCTTATAGTAACCAATGCCAGTCTTGGGGACACCATCCGAGGTTGTTGGCATGCCCTGTTTGCCACCCTCCAAGGTGTTGGCCCTGCCATCCTCTGTCTTATCATCGTGGGCCCTACCAGACTCACCGCCATCTCAACCTCCGTGGTGTTGGCTATCAGTGCCTTCTTCATAGTTCTTCCAGAGTGGACTCACATAGTGGCTAAGAGGATTGCTTTAGGCCAAATTGTGATCTTGTATGTAATTGGGTACATCAATAAGGAGCATACTCATGCTGTCATGCACCCTATTCATGTTGCTGCTAGCACCGCCGTTGGCACCTTCTCCTGTCTTTTGGCTTTGTTCTTCCCCTATCCTCACCTCGCTTACTCTGAGGTGAAACAAAACAGCAAGTTATTTGCAGAGAATGCATCAGAGAGGTTGAAGCTGTTTGTGAAGGCATTTTGTGCTGATGACAGTGCATCTTCACAAGAATTGATTTCTCAAGCCAAGTGTTTGGCTTCCAGGGGAAGAAAATTTCTTCAATGCATCAAATCCAGACAAGATAGCATGCACTGGGAAAGATTTCCAATAAAGTTTCTAAGACCTTACTGTAAGGACCCTGGAGATCGGTTTCAAGAGCTAGAGACGCCATTAAAGGGGATGGAGATCGCGTTAAGCAACTCAACGTTTCCTGTTTCGATATCAGATGAACAGTTCAAAGACAGGATGAACACAATAGAGGGAGAAATTAGCCAAAACATGGAACAAGTCAGGAGCCATTTGCCTTGTGAATCACTGACTGTCCCAGAATCAGATGCAGGACATGTTATGGATTCCCTTCAAGCTCTTGATACCTTCCCATCACGTGACAAAGATTTGCCCTCCTATTTCTTTTTGTTTTGTATGAAGCTTCTATACTCTCAATCAAGGGCCATGACCTTTATTCCAAATACACCTAAAGTTGATAAAACCTCTCTTGCAAAGCATAATGGGCTTTGCTTTGAAGATGTTTGGGCCAACTGGCCTATCACTCTTAGCAAGAAAAGGCTAATGCCTGCATTGAAAAGCTCCCTCTCCTTAGGCTTTGCCGTTCTTTTTGGGCTTTACTACAGCAGGCCTGATGGGTTCTGGGCCGGCCTGCCAGTAGCAATCAGCCTGGCAGCAGGTAGGGAGCCCACATTCAAAGTTGCCAACGTTAAGTTCCAAGGTACAGTTATTGGGACAGTCTTTGGGGTATTGGGCTGTGTTGTTTTCCAGAAGGCTTCACAATTCAGGTTCTTGGCTTTGTTTCCTTGGTTCATATTTACCAGTTTTCTTCAGCAGAGCAAAATGTATGGGCAAGCAGGTGGAGTTTCTGCAGTTATTGGGGCAGTTCTGATATTGGGCCGGAAAAACTTCGGCCCACCAAAGGACTTTGCTATTGCTAGAATTGTGGAAACTTTCATAGGTTTGTCCTGCTCAATCATGGTAGAACTAGTTTTGCAGCCTACTAGAGCTTCCTCCCTGGCCAAAGTTCAACTTCCCGAAACTCTAGGCACTCTGCGAAATTCTCTCTCCTTGGTCAACCTTCGCGCAATGTCAAAGTCAAAGTTGATGGATAGACAGAAAGTGCTCAAAGCACATGTGAATGAGCTAGGGAAATTTGTTAGTGAGGCTGAGGTGGAACCCAACTTCTGGTTTTTGCCTTTCCATAGTGCTGCTTATGGGAGGTTGGTAAGTTCTCTCTCTAAAATGACTGATCTCTTGATTTTCTTGTCTCATGCTATTGGCTCCCTAGAAGAGCAATTACAAGGACTGGAACAAATGGGTTGCAAGGGTGAAATTGATACGATTAATATTGACATTGAGAATGCTAGGAAAATGACAAGCTCTTCAATAAGAAGCCTCCAAGAGATCTCCTCAATCAAGTCCTTGGTAGTACTTGAAAAGGATCTTGTGAAACACAACAAGTCGTGTGATCTCGAGTTGGGGAAATCAGCCTACAACAACCAGTTGAATTTGGATGATAATGAGATTAACAAGATTATGAGGTCGTTGTTGGATCATTTCAAGGAAGTTGTTGAGAAAACAGAGGTCGAGGAAGATGAAAAGGAGATGAAAACTCAACTAGTTTTGAGCTTTAGTGCTCTTGGTTTTTGCTTGAGCTGTTTGATGAAGGAAACAAGAGAGATTCAGAAGGGAATACAGGAGGTTATACAGTGGGAAAATCCCAGCAGTCAGATAAATCTTAATGAAATATCGTGCAAGATACATGCCTTATACGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_101311.p1 GENE.R_Transcript_101311~~R_Transcript_101311.p1 ORF type:complete len:814 (+),score=138.81,FUSC_2|PF13515.2|0.0018,FUSC_2|PF13515.2|2.4e-13,FUSC|PF04632.8|1.2e+03,FUSC|PF04632.8|5.4e-08,FUSC|PF04632.8|2e+03 R_Transcript_101311:180-2621(+)
MSSTTGNIDSLNEQSKRTQAIWKSSLISASRTALACILVGCITLYGPASLKEQVAFPAFSYVTVVLIVTNASLGDTIRGCWHALFATLQGVGPAILCLIIVGPTRLTAISTSVVLAISAFFIVLPEWTHIVAKRIALGQIVILYVIGYINKEHTHAVMHPIHVAASTAVGTFSCLLALFFPYPHLAYSEVKQNSKLFAENASERLKLFVKAFCADDSASSQELISQAKCLASRGRKFLQCIKSRQDSMHWERFPIKFLRPYCKDPGDRFQELETPLKGMEIALSNSTFPVSISDEQFKDRMNTIEGEISQNMEQVRSHLPCESLTVPESDAGHVMDSLQALDTFPSRDKDLPSYFFLFCMKLLYSQSRAMTFIPNTPKVDKTSLAKHNGLCFEDVWANWPITLSKKRLMPALKSSLSLGFAVLFGLYYSRPDGFWAGLPVAISLAAGREPTFKVANVKFQGTVIGTVFGVLGCVVFQKASQFRFLALFPWFIFTSFLQQSKMYGQAGGVSAVIGAVLILGRKNFGPPKDFAIARIVETFIGLSCSIMVELVLQPTRASSLAKVQLPETLGTLRNSLSLVNLRAMSKSKLMDRQKVLKAHVNELGKFVSEAEVEPNFWFLPFHSAAYGRLVSSLSKMTDLLIFLSHAIGSLEEQLQGLEQMGCKGEIDTINIDIENARKMTSSSIRSLQEISSIKSLVVLEKDLVKHNKSCDLELGKSAYNNQLNLDDNEINKIMRSLLDHFKEVVEKTEVEEDEKEMKTQLVLSFSALGFCLSCLMKETREIQKGIQEVIQWENPSSQINLNEISCKIHALYD*

Click here to download the sequence:
Link to NCBI Protein BLAST