Transcript Information: R_Transcript_101610.p1


Annotated TAIR IDAT1G09910.1
Annotated Gene NameRhamnogalacturonate lyase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3220151-3224451 | Reverse length=675
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7037578569514
Replicate 28.0000963935593
Replicate 310.073444846501
Condition 2: 8 Hour
Replicate 15.6789506052346
Replicate 25.5228684065579
Replicate 37.9823347908931
Condition 3: 24 Hour
Replicate 111.409753592082
Replicate 210.031156905052
Replicate 39.3945720418159


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_101610.p1 GENE.R_Transcript_101610~~R_Transcript_101610.p1 ORF type:complete len:664 (+),score=102.31,Rhamnogal_lyase|PF06045.7|1.5e-90,CBM-like|PF14683.2|5.1e-57,fn3_3|PF14686.2|3.4e-29 R_Transcript_101610:368-2359(+)
ATGGCGAAAGGGAAATCGTGGATGTGTGGGTGCTGTGGTGGAGGTGGAAATGGAGGTGGAAGTTCAGGGCAGCCAACTGTTTCACCTGTTCAACTCCAAATTCTTGATCGTTATGTAGTATTAGATAATGGTTTACTGCAAGTGACACTGTCAAAGCCAGGGGGAATTGTCACTGGAATTAAATATAATGGCATTGACAATTTGCTTGAAGTTCGAAATGGAGAGGACAATAGAGGGTATTGGGATCTTGTATGGAATGACCCTAGTGCTGGGGGAGCTGGGAAATTCGATGTGATAAAAGGAAGTACTTTTGAAGTTATAATGTCAAATGAAGATCAGGTGGAAGTCTCCTTTTCTAGACGATGGGACTCCTCCTTGAAGGGCCAGTTAGTCCCCTTGAACATTGATAAAAGGTTTATTATGCTTCGTGGCTCATCCGGGTTCTACACCTATGCCATCTATGAGAAATTGAATGACTGGCCGGGGTTCAGCATGGGTGAAACTAGGATCACGTTCAAGCTCAACAAAGACAAGTTTCACTACATGGCTGTCGCGGATAACAGGCAAAGAGAAATGCCTTTGCCTGATGACAGAATGCCTGGAAGATGCCGACCCCTAGCCTACCCCGAAGCTGTTCTTCTCACCAACCCTGTAGAGCAGAACCTCAAAGGAGAGGTGGATGACAAATACCAATATTCATGCGATAACAAAGACATACTGGTCCATGGCTGGATTTGCACTGATCAGGCTACAGGATTTTGGCAAATTACACCCAGCTATGAATACCGGTCTGGTGGGCCTGTCAAACAAAACTTAACCTCCCATGTTGGCCCCACGTCCCTCTCGGTGTTTCTTAGTGCACATTATGCAGGGGATCCTCTGGTTCCCAAGTTTGAGGATGGGGAGCCTTGGAAAAAGGTTTTTGGTCCTGTTTTTATCTACTGTAATTCTTTGCCTAAGGAAAGCGATTGGCATTGGCTTTGGGAAGATGCTAAACAACAGATGATGATAGAAGCTCAGAGCTGGCCTTACAGCTTCCCAGCTTCGGAGGATTTTCCCCCATCCTATAAACGGGGTAATGTCAATGGCAGACTACTCATAAAAGACAGGTATGTTAGTGATGATTATATACCAGCAAGTGGAGCATATGTGGGATTAGCCCTGCCAGGGCCAGCTGGATCATGGCAGGCAGACAGCAAGGGTTACCAATTCTGGACAAGAGCAGATGAAAATGGCTATTTCCGCATCTATGGAATTCGAGAAGGGAATTACAATCTCTATGCCTGGGTCCCTGGTTTGATTGGAGACTATAAATGTGATGCTGACATTAACATAACTGCAGAATGTGATCTCCCAATGGGTGACTTGGTGTATGAGCCTCCAAGAGATGGACCGACCTTGTGGGAAATAGGAATCCCAGATCGTACTGCAGCAGAATTCTATGTTCCTGATCCTAATCCAACGTTTGTTAACAGACTTTATGTTAATCATCCTGACAGGTTTAGGCAATATGGTTTGTGGGAGAGATACGCAGAATTATATCCGAATGAAGATCTAGTTTACACTATTGGTGTCAGTGATTACCACAAGGATTGGTTCTTTGCTCAAGTTCCTAGGAAGAAAGAAAATGGATTTGTAGGAACAACATGGCAAATCAAGTTCAAACTCGACAAGGCAGACCAGAATGCAACCTACAAGTTGCGGTTAGCTATAGCATCTGCAACACTTGCAGAAGTACAGGTACGAGTCAACGATCCAAATGCAAATCGACCTGTATTCACAACAGGGTTGATAGGGAGAGATAACTCGGTTGCACGACATGGAATTCATGGTTTGTACTGGCTGTATAGCGTGGACATACAGGGGTCGAGGCTCGTACAAGGGGATAACACCATCTTTCTGACTCAACCAAGGAACCAGAGCCCATTCCAGGGTATCTTGTATGACTACTTGCGCCTTGAAGGGCCTCCTACATCATCTGCAAGCCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_101610.p1 GENE.R_Transcript_101610~~R_Transcript_101610.p1 ORF type:complete len:664 (+),score=102.31,Rhamnogal_lyase|PF06045.7|1.5e-90,CBM-like|PF14683.2|5.1e-57,fn3_3|PF14686.2|3.4e-29 R_Transcript_101610:368-2359(+)
MAKGKSWMCGCCGGGGNGGGSSGQPTVSPVQLQILDRYVVLDNGLLQVTLSKPGGIVTGIKYNGIDNLLEVRNGEDNRGYWDLVWNDPSAGGAGKFDVIKGSTFEVIMSNEDQVEVSFSRRWDSSLKGQLVPLNIDKRFIMLRGSSGFYTYAIYEKLNDWPGFSMGETRITFKLNKDKFHYMAVADNRQREMPLPDDRMPGRCRPLAYPEAVLLTNPVEQNLKGEVDDKYQYSCDNKDILVHGWICTDQATGFWQITPSYEYRSGGPVKQNLTSHVGPTSLSVFLSAHYAGDPLVPKFEDGEPWKKVFGPVFIYCNSLPKESDWHWLWEDAKQQMMIEAQSWPYSFPASEDFPPSYKRGNVNGRLLIKDRYVSDDYIPASGAYVGLALPGPAGSWQADSKGYQFWTRADENGYFRIYGIREGNYNLYAWVPGLIGDYKCDADINITAECDLPMGDLVYEPPRDGPTLWEIGIPDRTAAEFYVPDPNPTFVNRLYVNHPDRFRQYGLWERYAELYPNEDLVYTIGVSDYHKDWFFAQVPRKKENGFVGTTWQIKFKLDKADQNATYKLRLAIASATLAEVQVRVNDPNANRPVFTTGLIGRDNSVARHGIHGLYWLYSVDIQGSRLVQGDNTIFLTQPRNQSPFQGILYDYLRLEGPPTSSASQ*

Click here to download the sequence:
Link to NCBI Protein BLAST