Transcript Information: R_Transcript_101640.p1


Annotated TAIR IDAT2G27900.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:11877654-11885238 | Forward length=1124
E-Value5E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22863834181276
Replicate 20.087667225120242
Replicate 30.095643998313789
Condition 2: 8 Hour
Replicate 10.20447486386009
Replicate 20.32677697888998
Replicate 30.2273688177919
Condition 3: 24 Hour
Replicate 10.62307201244291
Replicate 20.092088763634978
Replicate 30.6854187271471


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_101640.p1 GENE.R_Transcript_101640~~R_Transcript_101640.p1 ORF type:3prime_partial len:479 (+),score=106.05,DUF2450|PF10475.5|2.1e-10 R_Transcript_101640:1403-2836(+)
ATGTTCTTGTGTTTTTTTGTGCTTGTAATCTCTAACATGGTTCCTCCTTGCTTGAGATTCAGTTCCAGACTTACATACAGCGACTTGTGCTTCCAAATTCCAGAATCTAAGTTCAGACATTGTTTACTAAGAACATTAGCTGTACTTTTTGGGTTGATGTGTTCATATTATGCAATATTGAGCTTCCATCCAGAGGACAAGAGGCCAGGCGGGGTTGAGCAAATGAATATTACGTCAGTAAGTTGTGAGTCTAGAGTGGATAGTGGATCAGAAGCAGCTGCTCCTGGTGAAAAGGAGCTTTTGTCTTCTGCTGGTGATTGTGCAACAAGAACCTCATCAGCAGATAATTCAGGAACTAATGGCTCCAATATTGTGAACGCGTTTGATCAGTCACTGGACGATAGTGCTGCTTCCAGCAGTGGATCTCCATGGTATGAGCTGCGAAGAGATGCTACAGCTCTTGTTTCACAATCTCTACAGAGGGGACGCAAAAATCTTTGGCAGCTTACAACAAGTCGTGTGTCAGTATTGCTTTCATCATCTGCATATTGTTCTACAAGTATTCATCAGTTCCTCAGAAATTATGAGGATCTGAACATATTTATTTTGGCTGGGGAAGCTTTTTGTGGAACAGAAGCTGTGGAGTTCAGGAATAAGTTGAAGAGTGCATGTGAACAATACTACAGTAATTTTCATAAACAGAATATACACGCTCTGAAGATGGTTCTGGAAAGGGAATGTTGGCAGAAACTTCCACCAGATGCAATTGAAGTAGTGAGTTTTGCCGGCCTTGTTGGTGATGGCGCACCCCTGATTGCGTCGTCAGATGTTGGCTTGATGAGTAGTCAATTACACTCAAACAAACTGGTCTATCCTGCTGAAAGTGATACAAAAAAGGGTGGATTTTCTCACTGGCTTACAAGTGGAAACCCCTTCTCGTTGAAAGTTTCTTCTCCTACAAATGGTCATACATCATCCCCCTTTGCTGATGGCCCATCTGGTTCTGGCGAACCTAACGGTAGCCCCAAAGACCATCAAATTGACAAATCATCACCCAGAAATAACAATGTGAATCCTACAAATGGTAACACTCCTAATCTAGAAGATGAAAATGAAGATCTTCTTGCTGATTTCATTGATGAAGATAGTCAACTCCCTAGCCGGATTTCTAAACCCAGTTCTCGACGAAATCACTCATCACAGTGGAGAGATGATGAGGCCACAGCACAAACAGGATCTTCGCTTTGCCTTTTAAGGTTCATGGACAAATATGCAAGGCTTATGCAGAAGTTAGGAATGGTTAATGTTGAGCTCTTCAAGGGTTTATGCCAGTTGTTCGAGATATATTATTATTTTGTGTTTGATGCTTTTGGCCATCAAGACAGCCATGCAAGTAGTAAAGTTGCTACTGATTCTCTGAACTATCGTCTGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_101640.p1 GENE.R_Transcript_101640~~R_Transcript_101640.p1 ORF type:3prime_partial len:479 (+),score=106.05,DUF2450|PF10475.5|2.1e-10 R_Transcript_101640:1403-2836(+)
MFLCFFVLVISNMVPPCLRFSSRLTYSDLCFQIPESKFRHCLLRTLAVLFGLMCSYYAILSFHPEDKRPGGVEQMNITSVSCESRVDSGSEAAAPGEKELLSSAGDCATRTSSADNSGTNGSNIVNAFDQSLDDSAASSSGSPWYELRRDATALVSQSLQRGRKNLWQLTTSRVSVLLSSSAYCSTSIHQFLRNYEDLNIFILAGEAFCGTEAVEFRNKLKSACEQYYSNFHKQNIHALKMVLERECWQKLPPDAIEVVSFAGLVGDGAPLIASSDVGLMSSQLHSNKLVYPAESDTKKGGFSHWLTSGNPFSLKVSSPTNGHTSSPFADGPSGSGEPNGSPKDHQIDKSSPRNNNVNPTNGNTPNLEDENEDLLADFIDEDSQLPSRISKPSSRRNHSSQWRDDEATAQTGSSLCLLRFMDKYARLMQKLGMVNVELFKGLCQLFEIYYYFVFDAFGHQDSHASSKVATDSLNYRLK

Click here to download the sequence:
Link to NCBI Protein BLAST