Transcript Information: R_Transcript_101642.p1


Annotated TAIR IDAT2G27900.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11877654-11885238 | Forward length=1124
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.385063693643
Replicate 211.176666200058
Replicate 313.920880926926
Condition 2: 8 Hour
Replicate 111.165906098026
Replicate 211.642110832933
Replicate 313.328561478884
Condition 3: 24 Hour
Replicate 113.292446734173
Replicate 211.186015505544
Replicate 312.692510976423


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_101642.p1 GENE.R_Transcript_101642~~R_Transcript_101642.p1 ORF type:complete len:1114 (+),score=240.00,DUF2450|PF10475.5|1.9e-88,DUF2451|PF10474.5|1.6e+03,DUF2451|PF10474.5|6.9e-71 R_Transcript_101642:237-3578(+)
ATGCAGCCAGGAACACCATCGCCATTTGGACAATACCTTTTGAGTCCACTCCCCTTCCTTTACAGCGTCAATGGCGAACTGAACAGTAATAGCGAGGGTTTCGACAGTTCTAGGGTTTTGTTTTTGGCTTCTTTGTGGTTGTTTCAAGGTGGTGGTTCTATGGATTTGTCCAAGGTCGGTGAAAAGATTCTTAGCTCCGTTCGCTCTGCTCGTTCTCTCGGTCTCCTTCCGTCCTCTTCTTCCGATCGTCCTGAGGTTCCTGCTAGGGCACAAGCAGCCACTGTTGCTAGGGCTCTTGCAACCCTTCCTCCTGACCAGAGGCTCAGTCTCCCATCAAGTTCTGCAGAATTAAGTTCTATATATGGAAGCAGGCCTCATGGTCCAATCGTTGAAGAATTAGAGGAAAACTTTTATGAAGAGAACTTCGATCCAGTCATGTACGTTCTGGAGAATATTCCATCAGAGGAAGAAGAATTGGAATATTTTGAAAATAAGGCCACCATTAGATTAGCCCAACTGGATAGAATATCTGAACGTTTATCCAGCCATGTCATGGAGCATCATGAAGAAATGGTTAAGGGGATGCAATTGGTAAGAGAGCTGGAAAGGGACCTGAAGATCGCCACGGTTATTTGCATGAATGGAAGGAGGCACCTGACATCTTCAATGCATGAGGTTTCAAGGGATCTTATTGTTACAACAAATTCAAAAAAGAAACAGGCTCTTCTGGACCTGCTTCCAGTTTTAACCGAACTACGTCATGCATTGAATATGCAGAAAGAGCTTGAATCACTTGTTGAGGAAGGGAAATACTGTAAGGCGTTTCAAGTGTTCTCTGAATACTTGCAGCTTCTAGATGCTCTTTCAGAGCTTTCAGCTGCGCAGGAAATGAGCCGCAGTGTTGAGGTTTGGCTGGAGAACACCCTTCAGAAGCTGGATTCCTTATTGTTACAAGTTTGCCAGGTTTTCAAAGAGGAAAAATATATAACTGTAGTAGATGCGTATGCATTAATCGGGGACGTTTCTGGTCTTGCGGAAAAGATACAGAGCTTTTTTATGCAAGAAGTTCTTTCAGAGACCCATTCTGCACTGAAGACTGCATTGCAAGAGGATCAGGATTCACAGACTTTTCAAATTAGTTCCAGACTTACATACAGCGACTTGTGCTTCCAAATTCCAGAATCTAAGTTCAGACATTGTTTACTAAGAACATTAGCTGTACTTTTTGGGTTGATGTGTTCATATTATGCAATATTGAGCTTTCAGTCAGAGAACAAGAGGCCAAGCGAGGTTGAGCAAACAAATATTGCGTCAGTAAGTTGTGAGTCTAGAGTGGATAGTGGATCAGAAGCAGCTGCTCCTGGTGAAAAGGAGCTTTTGTCTTCTGCTGGTGATTGTGCAACAAGAACCTCATCAGCAGATAATTCAGGAACTAATGGCTCCAATATTGTGAACGCGTTTGATCAGTCACTGGACGATAGTGCTGCTTCCAGCAGTGGATCTCCATGGTATGAGCTGCGAAGAGATGCTACAGCTCTTGTTTCACAATCTCTACAGAGGGGACGCAAAAATCTTTGGCAGCTTACAACAAGTCGTGTGTCAGTATTGCTTTCATCATCTGCATATTGTTCTACAAGTATTCATCAGTTCCTCAGAAATTATGAGGATCTGAACATATTTATTTTGGCTGGGGAAGCTTTTTGTGGAACAGAAGCTGTGGAGTTCAGGAATAAGTTGAAGAGTGCATGTGAACAATACTACAGTAATTTTCATAAACAGAATATACACGCTCTGAAGATGGTTCTGGAAAGGGAATGTTGGCAGAAACTTCCACCAGATGCAATTGAAGTAGTGAGTTTTGCCGGCCTTGTTGGTGATGGCGCACCCCTGATTGCGTCGTCAGATGTTGGCTTGATGAGTAGTCAATTACACTCAAACAAACTGGTCTATCCTGCTGAAAGTGATACAAAAAAGGGTGGATTTTCTCACTGGCTTACAAGTGGAAACCCCTTCTCGTTGAAAGTTTCTTCTCCTACAAATGGTCATACATCATCCCCCTTTGCTGATGGCCCATCTGGTTCTGGCGAACCTAACGGTAGCCCCAAAGACCATCAAATTGACAAATCATCACCCAGAAATAACAATGTGAATCCTACAAATGGTAACACTCCTAATCTAGAAGATGAAAATGAAGATCTTCTTGCTGATTTCATTGATGAAGATAGTCAACTCCCTAGCCGGATTTCTAAACCCAGTTCTCGACGAAATCACTCATCACAGTGGAGAGATGATGAGGCCACAGCACAAACAGGATCTTCGCTTTGCCTTTTAAGGTTCATGGACAAATATGCAAGGCTTATGCAGAAGTTAGGAATGGTTAATGTTGAGCTCTTCAAGGGTTTATGCCAGTTGTTCGAGATATATTATTATTTTGTGTTTGATGCTTTTGGCCATCAAGACAGCCATGCAAGTAGTAAAGTTGCTACTGATTCTCTGAACTATCGTCTGAAGACTGCTGTTAACAGAATAACGCAGGACTGTGAACAATGGTTGAAGCCCCAGCTGGTTACATCTTCATCGTCTGCTTCTCTGAATTCATCTTTCAAGCACATGGATCCTACACCTACAAGTCCACCTGGCAGTAATTTTGGTCTCAAGGAAACATGTGCTGCTGTTGATACAGTATCTCATATTGCTCGAATTTTGCATAGATCAAAGCCCCATCTTCAATCAATGCTATTACAAAATAACCCCGCGGTTGTTGAAGATTTTTTTGTGAATCTGGTTGATTCAGTGCCAGACCTTATAGAGCACATTCATAGAACAACTGCAAAATCACTTCTCCATATCAATGGGTATATTGATCGTATCGCTAGTTCTAAGTGGGAAGTCAAAGAGCTTGGAATGGAGCACAATGGTTATGTTGATCTGCTTTTGGGAGAATTCAAACATTACAGAACAAGACTTGCTCATGCAGGAATTCATAAGGAGATTCAAGACCTCCTATTGGAGCATGGTGTTGAAATTGTTGCAGAAACGCTTGTTGAAGGCCTATCACGTGTGAAGAGATGTACAGATGAAGGCCGGGCCCTTATGTCATTGGATCTACAGGTGTTGATTAATGGTCTTCAGCACTTCGTCTCTAAGGATGTAAAACCCAAACTACAAATAGTAGAGGCATTCATCAAGGCCTACTACCTTCCAGAAACTGAGTATGTGCATTGGGCACGGCAACACCCGGAATACAGCAAAAACCAAGTGGTAGGGCTAGTCAACCTTGTAGCAACCATGAAAGGTTGGAAAAGGAAAACAAGACTAGAAATTCTTGAAAAGATTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_101642.p1 GENE.R_Transcript_101642~~R_Transcript_101642.p1 ORF type:complete len:1114 (+),score=240.00,DUF2450|PF10475.5|1.9e-88,DUF2451|PF10474.5|1.6e+03,DUF2451|PF10474.5|6.9e-71 R_Transcript_101642:237-3578(+)
MQPGTPSPFGQYLLSPLPFLYSVNGELNSNSEGFDSSRVLFLASLWLFQGGGSMDLSKVGEKILSSVRSARSLGLLPSSSSDRPEVPARAQAATVARALATLPPDQRLSLPSSSAELSSIYGSRPHGPIVEELEENFYEENFDPVMYVLENIPSEEEELEYFENKATIRLAQLDRISERLSSHVMEHHEEMVKGMQLVRELERDLKIATVICMNGRRHLTSSMHEVSRDLIVTTNSKKKQALLDLLPVLTELRHALNMQKELESLVEEGKYCKAFQVFSEYLQLLDALSELSAAQEMSRSVEVWLENTLQKLDSLLLQVCQVFKEEKYITVVDAYALIGDVSGLAEKIQSFFMQEVLSETHSALKTALQEDQDSQTFQISSRLTYSDLCFQIPESKFRHCLLRTLAVLFGLMCSYYAILSFQSENKRPSEVEQTNIASVSCESRVDSGSEAAAPGEKELLSSAGDCATRTSSADNSGTNGSNIVNAFDQSLDDSAASSSGSPWYELRRDATALVSQSLQRGRKNLWQLTTSRVSVLLSSSAYCSTSIHQFLRNYEDLNIFILAGEAFCGTEAVEFRNKLKSACEQYYSNFHKQNIHALKMVLERECWQKLPPDAIEVVSFAGLVGDGAPLIASSDVGLMSSQLHSNKLVYPAESDTKKGGFSHWLTSGNPFSLKVSSPTNGHTSSPFADGPSGSGEPNGSPKDHQIDKSSPRNNNVNPTNGNTPNLEDENEDLLADFIDEDSQLPSRISKPSSRRNHSSQWRDDEATAQTGSSLCLLRFMDKYARLMQKLGMVNVELFKGLCQLFEIYYYFVFDAFGHQDSHASSKVATDSLNYRLKTAVNRITQDCEQWLKPQLVTSSSSASLNSSFKHMDPTPTSPPGSNFGLKETCAAVDTVSHIARILHRSKPHLQSMLLQNNPAVVEDFFVNLVDSVPDLIEHIHRTTAKSLLHINGYIDRIASSKWEVKELGMEHNGYVDLLLGEFKHYRTRLAHAGIHKEIQDLLLEHGVEIVAETLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHFVSKDVKPKLQIVEAFIKAYYLPETEYVHWARQHPEYSKNQVVGLVNLVATMKGWKRKTRLEILEKIE*

Click here to download the sequence:
Link to NCBI Protein BLAST