Transcript Information: R_Transcript_101792.p1


Annotated TAIR IDAT4G32910.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15881364-15885210 | Forward length=716
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.24133678639423
Replicate 30.26329583443853
Condition 2: 8 Hour
Replicate 10.28144672353155
Replicate 20.51404326071691
Replicate 30.20863920253318
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 31.0063312499723


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_101792.p1 GENE.R_Transcript_101792~~R_Transcript_101792.p1 ORF type:5prime_partial len:87 (+),score=5.26 R_Transcript_101792:2-262(+)
GGAAATGCTGAGCATCTTTCTGCAACGACGTGTAACTGGGTTGAACTTTATGTATCTCATTTTCTATACATCAGGCCATTCACTATGGTTAGTAATCTGCAAATATGTTGTGCTCCTTTGACCTGCGATGTAAATGTTGGAATTTCATTTTCCATTCAACATAAATATAGTGAACCTTTGATTTTTGAGTCAGGGTTTAGAAAGTATGTACAGCCTAGCTCAGAAATGCATCCAGTTGAAGCCTGTGTCCCATTCCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_101792.p1 GENE.R_Transcript_101792~~R_Transcript_101792.p1 ORF type:5prime_partial len:87 (+),score=5.26 R_Transcript_101792:2-262(+)
GNAEHLSATTCNWVELYVSHFLYIRPFTMVSNLQICCAPLTCDVNVGISFSIQHKYSEPLIFESGFRKYVQPSSEMHPVEACVPFQ*

Click here to download the sequence:
Link to NCBI Protein BLAST