Transcript Information: R_Transcript_102012.p1


Annotated TAIR IDAT4G12420.1
Annotated Gene NameCupredoxin superfamily protein
Annotated Gene Symbol(s)SKU5
Annotation TypeOrtholog
Chromosome Positionchr4:7349941-7352868 | Reverse length=587
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 152.945878324883
Replicate 237.008630531758
Replicate 348.512922383771
Condition 2: 8 Hour
Replicate 120.116333492013
Replicate 214.4555195741
Replicate 322.73535067604
Condition 3: 24 Hour
Replicate 152.060886087066
Replicate 248.566125637837
Replicate 350.997614960717


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_102012.p1 GENE.R_Transcript_102012~~R_Transcript_102012.p1 ORF type:complete len:594 (+),score=94.72,Cu-oxidase|PF00394.18|2.4e-43,Cu-oxidase|PF00394.18|79,Cu-oxidase_3|PF07732.11|1.2e-39,Cu-oxidase_3|PF07732.11|15,Cu-oxidase_3|PF07732.11|1.1e+04,Cu-oxidase_2|PF07731.10|4.1e+03,Cu-oxidase_2|PF07731.10|1.2e-25 R_Transcript_102012:346-2127(+)
ATGCCTTCCACTAGCATTATAGTGTTGTTTATTCTCAACATTTCACTGTTAGTGAGCTTATCCTTAGCTGGAGACGCCTTTGTTTACTATGATTTTGAGGTCTCTTACATCAATGCTTCTCCTTTGGGAGTTCAACAGCAGGTCATTGCTGTAAATGGAATATTTCCTGGACCTCCCATTAATGTAACCACTAATGAACATGTGGTTGTCAATGTGAGGAACAAATTGGATGAAGATCTCTTAATCACTTGGGCTGGGGTATTTCAGAGAAAGAGCAGTTGGCAAGATGGTGTATTGGGGACTAATTGCCCAATACCACCAAAGTGGAACTGGACTTACAATTTCCAAGTAAAGGATCAGATTGGAAGTTTCTTTTACTTCCCTTCATTGAACTTCCAGAGAGCTGCTGGAGGTTCTGGTGGCATTATCATTAACAACCGCCCCGTCATTCCAGTTCCTTTTGCCCCCCCTGAGGCTGATATTATAATCCTTATTGGGGATTGGTACACCAGGAGTCATGTGGATTTGAGGAAAGCTTTGGATCAAGGGAAGTCATTAGGAAAGCCAGATGGTGTACTTATAAATGGGAAAGGACCTTACAGATATAATGACACCCTTGTTCCTGACGGCATTGATTATGAGACTATTAATGTTGATCCTGGGAAAACATATCGCCTCCGTGTACACAATGTCGGAGTCTCAACTAGCTTGAACTTCAGAATTCAAAACCATAATCTGCTTTTAGCAGAAACTGAGGGATCCTACACTGTGCAACAAAACTACACTAGTTTGGACATTCATGTCGGGCAATCTTATTCATTCTTGGTTACTATGGACCAAAATGCAAGCTCTGATTACTACATAGTGGCAAGTGCTCGGTTTGTCAATGAAACAACTTGGCAGCGGGTAACTGGAGTTGGAATCTTGCGTTACTCAAATTCCAAAGGAAAGGCAAAAGGCCCCCTCCCAGAAGCCCCACAAGATGAATTTGACAAGACTTTCTCCATGAACCAGGCTAGATCAATCAGGTGGAACGTGAGTGCTAGTGGTGCCCGTCCCAACCCGCAGGGCTCCTTCAAATATGGTTCCATAAATGTGACCAGTCGTTATGTTTTACAACACAAGGCACCAGAGAAAGTAAATGGAAAAAAAAGGGCTACACTCAATGGTGTTTCATTTGTGAATCCTACCACACCAATTAGGCTTGCTGATAAGCACAAAGTGAAAGGCATTTATAAGCTCGACTTTCCCCATAAGCCATTGACAGGACCGCCAAAAATGAGCACGTCGGTGATCAATGGATCATTCAGGGGTTTTGTGGAACTCATCCTTCAAAACAATGACACGAAGGTGCACACATTCCACCTCGATGGGTACAACTTTTTTGTGGTTGGGATGGACTATGGTGAGTGGACAGAAAACAGCATTGGAACATACAACAAATGGGATGGGATTGCCCGTACTTCAGCCCAGGTTTACCCGGGGGCATGGACTGCTATTCTAGTTTCCCTCGATAATGTTGGTGTTTGGAATCTGAGAACAGAAAATCTGGATGCATGGTATCTTGGACAAGAAACCTATATCAGAGTAATCAATAAAGAAGTAGAAAACAATCCAGAGCTCCAAAGCAAGTTTGAGTTTAACATTCCAGATAATGTACTTTACTGTGGCGCGCTTCGCAAGCTGCAAAAGCCTCAGCGTATCTCTTCTGCAACGAGCAATTCCATTCAGCAAATGTTTACATTGTTGATGATTTGTGTTGCAGTTTTCCTTATCCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_102012.p1 GENE.R_Transcript_102012~~R_Transcript_102012.p1 ORF type:complete len:594 (+),score=94.72,Cu-oxidase|PF00394.18|2.4e-43,Cu-oxidase|PF00394.18|79,Cu-oxidase_3|PF07732.11|1.2e-39,Cu-oxidase_3|PF07732.11|15,Cu-oxidase_3|PF07732.11|1.1e+04,Cu-oxidase_2|PF07731.10|4.1e+03,Cu-oxidase_2|PF07731.10|1.2e-25 R_Transcript_102012:346-2127(+)
MPSTSIIVLFILNISLLVSLSLAGDAFVYYDFEVSYINASPLGVQQQVIAVNGIFPGPPINVTTNEHVVVNVRNKLDEDLLITWAGVFQRKSSWQDGVLGTNCPIPPKWNWTYNFQVKDQIGSFFYFPSLNFQRAAGGSGGIIINNRPVIPVPFAPPEADIIILIGDWYTRSHVDLRKALDQGKSLGKPDGVLINGKGPYRYNDTLVPDGIDYETINVDPGKTYRLRVHNVGVSTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARFVNETTWQRVTGVGILRYSNSKGKAKGPLPEAPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSINVTSRYVLQHKAPEKVNGKKRATLNGVSFVNPTTPIRLADKHKVKGIYKLDFPHKPLTGPPKMSTSVINGSFRGFVELILQNNDTKVHTFHLDGYNFFVVGMDYGEWTENSIGTYNKWDGIARTSAQVYPGAWTAILVSLDNVGVWNLRTENLDAWYLGQETYIRVINKEVENNPELQSKFEFNIPDNVLYCGALRKLQKPQRISSATSNSIQQMFTLLMICVAVFLIH*

Click here to download the sequence:
Link to NCBI Protein BLAST