Transcript Information: R_Transcript_102019.p1


Annotated TAIR IDAT1G12310.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4187500-4187946 | Reverse length=148
E-Value1.6E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0850308968974
Replicate 28.7024139883341
Replicate 38.2886221565025
Condition 2: 8 Hour
Replicate 15.9603750200531
Replicate 26.0315536545303
Replicate 34.8961581278675
Condition 3: 24 Hour
Replicate 16.796719245044
Replicate 29.4315251834705
Replicate 39.5038717719423


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_102019.p1 GENE.R_Transcript_102019~~R_Transcript_102019.p1 ORF type:complete len:152 (-),score=29.91,EF-hand_1|PF00036.28|1.7e-07,EF-hand_1|PF00036.28|2.7e-06,EF-hand_1|PF00036.28|0.1,EF-hand_7|PF13499.2|1.7e-05,EF-hand_7|PF13499.2|3.9e-12,EF-hand_6|PF13405.2|9.8e-09,EF-hand_6|PF13405.2|1.6e+04,EF-hand_6|PF13405.2|1.5e-06,EF-hand_6|PF13405.2|7.1e+02,EF-hand_6|PF13405.2|18,EF-hand_5|PF13202.2|8.6e-06,EF-hand_5|PF13202.2|3.1e+03,EF-hand_5|PF13202.2|0.00089,EF-hand_5|PF13202.2|6.1e+02,EF-hand_5|PF13202.2|32,EF-hand_8|PF13833.2|0.079,EF-hand_8|PF13833.2|46,EF-hand_8|PF13833.2|1.5e-06,EF-hand_9|PF14658.2|2.6,EF-hand_9|PF14658.2|0.0064 R_Transcript_102019:99-554(-)
ATGGGAAGACAATATGAGTACGTAGAAGACGAGCAGGTAGTCTCAATGAGAGAAGCATTTGCTCTGTTTGACACTGATGGTGATGGCAAGATATCCCCCTCGGATCTAGGCATAGTCATGCGCTCACTCGGGTCAAACCCGACCCAAGCTCAGCTCCGGGTCATCGAGGAACGAGAGAAGCTGACTTCCCCCTTTGAATTTGAGCGGTTCTTGGACTTGATGACCAAGTACATGAAGCCTGATGACCCGTTTGAGTCGGAGCTCCGTGATGCTTTCCGGATCCTGGATAAGGACTCGTCCGGGTTCGTGTCGGTGTCGGATCTTCGACATATATTGACAAGCATAGGGGAGAAGCTCGACCCGGATGAGTTTGATGAGTGGATCCAAGAAGTGGATGTTGGGTCTGATGGAAGGCTTCAGTACGAGGATTTCATCTCTCAACTTCTTGTCAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_102019.p1 GENE.R_Transcript_102019~~R_Transcript_102019.p1 ORF type:complete len:152 (-),score=29.91,EF-hand_1|PF00036.28|1.7e-07,EF-hand_1|PF00036.28|2.7e-06,EF-hand_1|PF00036.28|0.1,EF-hand_7|PF13499.2|1.7e-05,EF-hand_7|PF13499.2|3.9e-12,EF-hand_6|PF13405.2|9.8e-09,EF-hand_6|PF13405.2|1.6e+04,EF-hand_6|PF13405.2|1.5e-06,EF-hand_6|PF13405.2|7.1e+02,EF-hand_6|PF13405.2|18,EF-hand_5|PF13202.2|8.6e-06,EF-hand_5|PF13202.2|3.1e+03,EF-hand_5|PF13202.2|0.00089,EF-hand_5|PF13202.2|6.1e+02,EF-hand_5|PF13202.2|32,EF-hand_8|PF13833.2|0.079,EF-hand_8|PF13833.2|46,EF-hand_8|PF13833.2|1.5e-06,EF-hand_9|PF14658.2|2.6,EF-hand_9|PF14658.2|0.0064 R_Transcript_102019:99-554(-)
MGRQYEYVEDEQVVSMREAFALFDTDGDGKISPSDLGIVMRSLGSNPTQAQLRVIEEREKLTSPFEFERFLDLMTKYMKPDDPFESELRDAFRILDKDSSGFVSVSDLRHILTSIGEKLDPDEFDEWIQEVDVGSDGRLQYEDFISQLLVK*

Click here to download the sequence:
Link to NCBI Protein BLAST