Transcript Information: R_Transcript_102047.p1


Annotated TAIR IDAT5G43020.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17255426-17257742 | Reverse length=669
E-Value3.9E-239
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9472860768378
Replicate 24.9495783263646
Replicate 35.9502486548564
Condition 2: 8 Hour
Replicate 15.698662262497
Replicate 23.1224654823277
Replicate 33.1887964603383
Condition 3: 24 Hour
Replicate 17.8249583193526
Replicate 27.0537089244639
Replicate 36.2771044972934


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_102047.p1 GENE.R_Transcript_102047~~R_Transcript_102047.p1 ORF type:complete len:666 (+),score=78.61,Pkinase|PF00069.21|1.1e-31,Pkinase_Tyr|PF07714.13|4e-30,LRR_8|PF13855.2|0.00021,LRR_8|PF13855.2|1e-07,LRR_8|PF13855.2|2.1e+02,LRR_4|PF12799.3|0.56,LRR_4|PF12799.3|0.065,LRR_4|PF12799.3|0.043,LRR_4|PF12799.3|0.017,LRR_1|PF00560.29|4.9,LRR_1|PF00560.29|23,LRR_1|PF00560.29|2.8,LRR_1|PF00560.29|2e+03,LRR_1|PF00560.29|1.2e+02 R_Transcript_102047:130-2127(+)
ATGCTGATGAGCAGCAGCCATCTCTTCCTCCTAATATTATCAATAATCTTCTCCTATTTAATTCCCTTGTCTTCCTCAAGGAAATTAGTCTTACCCTCTGACGCTCAAGCCCTTCTAGACTTCAAACATAAAGCCGATCTACACAACAAGCTCTGGTTCAACACCTCCTTCTCTCACTGCAAATGGCAAGGCGTCCAGTGCTCCCGAAACCGTGTTGTTCGTCTCGTCATTGAAGGGCAAACTCTTACCAACGGCACTTTCCTCCCTGACTCGTTGACTCGGTTAGACCAGCTCCGAGTCTTGAGTCTGAGCAACAACTCGCTGGTGGGTCCCATCCCTGACCTCTCCGACCTCGTCAACCTCAAAGCCCTCTTCTTACACCACAACCACTTCACCGGTCACTTCCCCCCCTCCATTGCTTCTCTCCACCGAATCAGGACCCTTGATCTCTCCTACAACAACCTCACGGGCGATTTCCCCTCCTGGTTAACTCAGCTCAGCAGGCTTTACTACCTCCGAGTCGAGTTCAATGACTTCTCTGGAACCATCCCAACCCTGAACCAGTCCACATTGTCTGTCTTCAATGTGTCCAACAATAACCTCACCGGCCCAATTCCGGTTACCCCCATTTTATCAAAGTTTAGCTTGTCTACTTTCGCTCATAATCCGGGTTTATGTGGAGAGATAGTCCACAAAGAATGCCGACCTCAGTCCCCCTTTTTCCGTCCCGTTATGCCCTCTGCTCCCGTCCCCGTCACCATTGAGCAGTTACAGGGCTCCGAGTTGACTCGGTCTAGTCAGACTCGCCACAGAAGGGGTGCCATCATATTTGGCTTCTGCTCAGGTGTAGCGATTTTACTAGGGTCGATAGTGTGCTTCGCGTTGGCATTGCGGAAACATAGGAGAGAGAACCGAATGACGTCAGAAACAATGGCGTCGGACATGATGGTGGCAGCTGACGTGGCAGCCGTGATGAGATTAGAGGAGGAGAGAGAACAGAAAGTGAAGAGCGCACAACTAGAAGTACAACAAGGGAGTGGTGGGGGTGGCATGACGATGAAGGTGACAGGGGGAATTGGGAACGGAAAGAGTGGGCCCTTGTTATTCTGTGCAGGTGAGGCGCAGCTGTATACGCTGGACCAGCTAATGAGAGCTTCAGCTGAGCTGCTTGGGAGAGGGAGTATTGGGACAACTTACAAGGCAGTGCTTGATAACCGTTTGATTGTTTGTGTGAAGAGGCTTGATTCCAGTAAGATTGGGGGTCCTGGAAAAGAGGTTTTTGAGCAACATATGGAATCAGTGGGTGCGCTTAGACATCCTAATTTGGTCCCCTTGAGGGCTTACTTTCAGGCTCAAGATGAGAGGCTTCTCGTCTATGATTATCAGCCCAATGGCAGTCTCTTCTCTCTCATTCACGGATCTAAATCAGCACGAGCAAAGCCCCTACACTGGACATCCTGCTTGAAAATAGCAGAGGATGTAGCTCAAGGTCTCTCTTACATTCACCAAGCTTGGAGACTAGTCCATGGCAACCTCAAATCTTCTAATGTTCTCCTTGGATCCGACTTTGAGGCCTGTGTTACTGACTATTGCCTAAATTCGTTAACTGAGCCTTCTCTATCAGCAACAAATGATCCAGACTCTTCTGGGTACAAAGCACCAGAGAGCCGTAAGCCAGATTTTCAAGCAACCTCAAAATCAGATGTGTATGCATTTGGAGTTTTGCTACTCCAGCTGTTGACAGGCAAACCGCCATCTCAACATCCCTATTTAACTCCGAATGATATAGTAAGATGGGTGAGGTCGGCAAGGGATCTTGAAGATGGAAGCACCGATGAGAATAAGCTTGCTATGCTTCTTGAAGTGGCAATAGCCTGCAGTATGGCTTCCCCTGAGAAGAGACCAAACATGTGGCAAGTTTTGAAGATGTTGCAAGAAATTAAGGAGGCTGTGTTAATGGAAGACAATGAATTGGATCTCGGTGAGGGGATGGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_102047.p1 GENE.R_Transcript_102047~~R_Transcript_102047.p1 ORF type:complete len:666 (+),score=78.61,Pkinase|PF00069.21|1.1e-31,Pkinase_Tyr|PF07714.13|4e-30,LRR_8|PF13855.2|0.00021,LRR_8|PF13855.2|1e-07,LRR_8|PF13855.2|2.1e+02,LRR_4|PF12799.3|0.56,LRR_4|PF12799.3|0.065,LRR_4|PF12799.3|0.043,LRR_4|PF12799.3|0.017,LRR_1|PF00560.29|4.9,LRR_1|PF00560.29|23,LRR_1|PF00560.29|2.8,LRR_1|PF00560.29|2e+03,LRR_1|PF00560.29|1.2e+02 R_Transcript_102047:130-2127(+)
MLMSSSHLFLLILSIIFSYLIPLSSSRKLVLPSDAQALLDFKHKADLHNKLWFNTSFSHCKWQGVQCSRNRVVRLVIEGQTLTNGTFLPDSLTRLDQLRVLSLSNNSLVGPIPDLSDLVNLKALFLHHNHFTGHFPPSIASLHRIRTLDLSYNNLTGDFPSWLTQLSRLYYLRVEFNDFSGTIPTLNQSTLSVFNVSNNNLTGPIPVTPILSKFSLSTFAHNPGLCGEIVHKECRPQSPFFRPVMPSAPVPVTIEQLQGSELTRSSQTRHRRGAIIFGFCSGVAILLGSIVCFALALRKHRRENRMTSETMASDMMVAADVAAVMRLEEEREQKVKSAQLEVQQGSGGGGMTMKVTGGIGNGKSGPLLFCAGEAQLYTLDQLMRASAELLGRGSIGTTYKAVLDNRLIVCVKRLDSSKIGGPGKEVFEQHMESVGALRHPNLVPLRAYFQAQDERLLVYDYQPNGSLFSLIHGSKSARAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGSDFEACVTDYCLNSLTEPSLSATNDPDSSGYKAPESRKPDFQATSKSDVYAFGVLLLQLLTGKPPSQHPYLTPNDIVRWVRSARDLEDGSTDENKLAMLLEVAIACSMASPEKRPNMWQVLKMLQEIKEAVLMEDNELDLGEGMA*

Click here to download the sequence:
Link to NCBI Protein BLAST