Transcript Information: R_Transcript_102367.p1


Annotated TAIR IDAT3G48150.1
Annotated Gene Nameanaphase-promoting complex subunit 8
Annotated Gene Symbol(s)APC8, CDC23
Annotation TypeOrtholog
Chromosome Positionchr3:17779800-17782565 | Reverse length=579
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.751182587884
Replicate 23.4590280751727
Replicate 34.5285148460268
Condition 2: 8 Hour
Replicate 14.0742542992945
Replicate 23.2417752916381
Replicate 35.382685192207
Condition 3: 24 Hour
Replicate 17.1483122998947
Replicate 25.5955681534578
Replicate 37.1757054904326


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_102367.p1 GENE.R_Transcript_102367~~R_Transcript_102367.p1 ORF type:complete len:607 (+),score=93.14,ANAPC8|PF04049.9|2e-42,ANAPC8|PF04049.9|2.6e+02,TPR_1|PF00515.24|1.3e+02,TPR_1|PF00515.24|2e+03,TPR_1|PF00515.24|5.5e-05,TPR_1|PF00515.24|0.001,TPR_1|PF00515.24|0.00087,TPR_1|PF00515.24|0.16,TPR_1|PF00515.24|1.6,TPR_1|PF00515.24|1,TPR_8|PF13181.2|8.4e+02,TPR_8|PF13181.2|63,TPR_8|PF13181.2|1e+04,TPR_8|PF13181.2|2e+03,TPR_8|PF13181.2|3.3e-05,TPR_8|PF13181.2|0.015,TPR_8|PF13181.2|3.5,TPR_8|PF13181.2|0.28,TPR_8|PF13181.2|0.9,TPR_8|PF13181.2|1,TPR_11|PF13414.2|1.8e+02,TPR_11|PF13414.2|1.2e+03,TPR_11|PF13414.2|9.1e+03,TPR_11|PF13414.2|6.9e+02,TPR_11|PF13414.2|0.0068,TPR_11|PF13414.2|3.7e-06,TPR_11|PF13414.2|0.00018,TPR_11|PF13414.2|0.0026,TPR_11|PF13414.2|0.016,TPR_14|PF13428.2|1.2e+03,TPR_14|PF13428.2|21,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|0.0074,TPR_14|PF13428.2|0.013,TPR_14|PF13428.2|5.6,TPR_14|PF13428.2|6.5,TPR_14|PF13428.2|2.8e+02,TPR_14|PF13428.2|0.37,TPR_2|PF07719.13|48,TPR_2|PF07719.13|1.3e+04,TPR_2|PF07719.13|1.5e+02,TPR_2|PF07719.13|9e+03,TPR_2|PF07719.13|2.2e+02,TPR_2|PF07719.13|0.025,TPR_2|PF07719.13|1.2,TPR_2|PF07719.13|0.16,TPR_2|PF07719.13|1.2,TPR_2|PF07719.13|0.077,TPR_2|PF07719.13|0.027,TPR_12|PF13424.2|1.1e+04,TPR_12|PF13424.2|7.6e+02,TPR_12|PF13424.2|1e+03,TPR_12|PF13424.2|2.5e+03,TPR_12|PF13424.2|1.2e-05,TPR_12|PF13424.2|0.16,TPR_12|PF13424.2|0.00068,TPR_12|PF13424.2|0.014,ANAPC3|PF12895.3|0.00025,ANAPC3|PF12895.3|0.021,ANAPC3|PF12895.3|0.28,ANAPC3|PF12895.3|2.8,TPR_7|PF13176.2|1.9e+02,TPR_7|PF13176.2|6.7e+02,TPR_7|PF13176.2|73,TPR_7|PF13176.2|0.29,TPR_7|PF13176.2|2.1e+03,TPR_7|PF13176.2|1.5,TPR_7|PF13176.2|0.1,TPR_7|PF13176.2|0.1,TPR_19|PF14559.2|2.3e+03,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|73,TPR_19|PF14559.2|1.3e+03,TPR_19|PF14559.2|0.34,TPR_19|PF14559.2|1,TPR_19|PF14559.2|68,TPR_19|PF14559.2|0.027,TPR_17|PF13431.2|4.8e+02,TPR_17|PF13431.2|4.6e+03,TPR_17|PF13431.2|1.2e+04,TPR_17|PF13431.2|4.1e+03,TPR_17|PF13431.2|27,TPR_17|PF13431.2|0.035,TPR_17|PF13431.2|0.19,TPR_17|PF13431.2|4.6,TPR_17|PF13431.2|3e+02,TPR_16|PF13432.2|4.8e+02,TPR_16|PF13432.2|1.6e+03,TPR_16|PF13432.2|60,TPR_16|PF13432.2|1.9e+03,TPR_16|PF13432.2|0.00024,TPR_16|PF13432.2|19,TPR_16|PF13432.2|0.0078 R_Transcript_102367:70-1821(+)
ATGGATTCCAAAGAGACTTGTAGAAACGAGGTACGAGTCGCTGTTCGTCAACTCAGCAATCGTGGTCTCTACACTGCTTCCAAATGGGCAGCAGAGCAGTTGTTAGGAATTGAGCAAGACCCAGCAAAGTTTACGCCTTCTCATACTCGGTTCCAGAGAGGTAGCTCAAGCATTTGTCGTAGATTTAGAACCAATGATCCCACTTCAACGCCTAGTCCTAGTGTTTCTTATGTCTCTACACCTGTGCCAGAGGAGGATGATGACACTATTGACACTGACTTCTATCTTCTGGCTAAGTCTTACTTTGATTGTAAGGAGTATAGGAGGGCTGCTCATGTTCTACGGGACCAAACTGGACGGAAAGCCGTGTTCTTGCGATGCTATGCCTTGTATTTGGCTGGAGAGAAACGGAAGGAAGAAGAAATAATAGAACTTGAGGGGCCCTTGGGCAAAAGCAACATTGTGAATGGTGAATTGGCTTCCCTTGAAAGGGAGTTGTCCACATTGCGGAAACGGGGTGGTCTTGATTCATTTGGACTGTATTTGTATGGTCTAGTGCTGAAAGAGAAGGGAAATGAGAATCTCGCTCGTGCTCTCCTAGTTGAGTCTGTAAATAGCTATCCATGGAATTGGAGTGCTTGGTTGGCTCTACGGTCACTGTGCACCACAATCGACATTTTGAACAGCCTTAATCTCAATAACCATTGGATGAAAGACTTTTTCTTCGCTAGTGCTTATGAAGAACTCAGATTGCACAAGGAATCCATGGAAAAATATGAACATCTCCAGAAAACTTTTTCTTTCAGCAGCTACTTACAGGCTCGGAAGGCAAGTGTGCAGTACAATTTAAGAGAGTTTGACCAGGTTGAAATTATCTTTGAGGAGCTCTTGCGAAATGACCCTTACCGAATTGAGGACATGGATATGTACTCCAACGTGCTCTATGCAAAGGAAGCGTTTTCTGCCCTTAGCTATCTAGCCCACAGGGTATTCTTGACTGACAAATATAGGCCTGAATCATGCTGCATAATCGGTAATTATTATAGTTCAAAAGGACAGCATGAGAAATCAGTTATGTATTTCAGGAGGGCTCTTAAGTTGGACAAAAACTATTTAACTGCCTGGACACTGATGGGTCACGAGTTTGTGGAGATGAAGAACACACCAGCGGCCGTGGATGCTTACCGTAGAGCTGTGGACATAAATCCATGTGATTACCGTGCCTGGTACGGATTAGGACAAGCATATGAAATGATGGTCATGCCCCTTTATGCTCTATATTACTTCAGAAAATCAGTATCCCTTCAACCAAATGATGCTCGGCTGTGGATTGCTATGGCCCACTGTTACGAGAGTGACCAGCTTCATATGTTTGAGGAGGCAATCAAGTGTTATAAACGAGCAGCAAATTGCCAAGACACTGAGGCAATTGCAGTTAATAGGCTGGCAAAACTGCATGATCAGCTTGGGCATCATGCAGAGGCTGCGTTTTACTACAAGAAGGATCTGGAGAGAATGGAAGTTGAAGAAAGAGAAGGGCCAAACATGGTTGATGCTCTGATGTTTCTTGCAAGATATTATAGAGCACAGGAGAGATTTGAAGAAGCGGAGATATACTGTACCCGATTGCTCGATTATAATGGGCCTGAAAAAGAAACAGCAAAGAGTTTGCTCAGAGCTATGAAAATGGCGCAATCTGGTTTTCCTTCACTCGATGTCGACCACTTTCCACCCTTTGGTTCTCACTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_102367.p1 GENE.R_Transcript_102367~~R_Transcript_102367.p1 ORF type:complete len:607 (+),score=93.14,ANAPC8|PF04049.9|2e-42,ANAPC8|PF04049.9|2.6e+02,TPR_1|PF00515.24|1.3e+02,TPR_1|PF00515.24|2e+03,TPR_1|PF00515.24|5.5e-05,TPR_1|PF00515.24|0.001,TPR_1|PF00515.24|0.00087,TPR_1|PF00515.24|0.16,TPR_1|PF00515.24|1.6,TPR_1|PF00515.24|1,TPR_8|PF13181.2|8.4e+02,TPR_8|PF13181.2|63,TPR_8|PF13181.2|1e+04,TPR_8|PF13181.2|2e+03,TPR_8|PF13181.2|3.3e-05,TPR_8|PF13181.2|0.015,TPR_8|PF13181.2|3.5,TPR_8|PF13181.2|0.28,TPR_8|PF13181.2|0.9,TPR_8|PF13181.2|1,TPR_11|PF13414.2|1.8e+02,TPR_11|PF13414.2|1.2e+03,TPR_11|PF13414.2|9.1e+03,TPR_11|PF13414.2|6.9e+02,TPR_11|PF13414.2|0.0068,TPR_11|PF13414.2|3.7e-06,TPR_11|PF13414.2|0.00018,TPR_11|PF13414.2|0.0026,TPR_11|PF13414.2|0.016,TPR_14|PF13428.2|1.2e+03,TPR_14|PF13428.2|21,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|0.0074,TPR_14|PF13428.2|0.013,TPR_14|PF13428.2|5.6,TPR_14|PF13428.2|6.5,TPR_14|PF13428.2|2.8e+02,TPR_14|PF13428.2|0.37,TPR_2|PF07719.13|48,TPR_2|PF07719.13|1.3e+04,TPR_2|PF07719.13|1.5e+02,TPR_2|PF07719.13|9e+03,TPR_2|PF07719.13|2.2e+02,TPR_2|PF07719.13|0.025,TPR_2|PF07719.13|1.2,TPR_2|PF07719.13|0.16,TPR_2|PF07719.13|1.2,TPR_2|PF07719.13|0.077,TPR_2|PF07719.13|0.027,TPR_12|PF13424.2|1.1e+04,TPR_12|PF13424.2|7.6e+02,TPR_12|PF13424.2|1e+03,TPR_12|PF13424.2|2.5e+03,TPR_12|PF13424.2|1.2e-05,TPR_12|PF13424.2|0.16,TPR_12|PF13424.2|0.00068,TPR_12|PF13424.2|0.014,ANAPC3|PF12895.3|0.00025,ANAPC3|PF12895.3|0.021,ANAPC3|PF12895.3|0.28,ANAPC3|PF12895.3|2.8,TPR_7|PF13176.2|1.9e+02,TPR_7|PF13176.2|6.7e+02,TPR_7|PF13176.2|73,TPR_7|PF13176.2|0.29,TPR_7|PF13176.2|2.1e+03,TPR_7|PF13176.2|1.5,TPR_7|PF13176.2|0.1,TPR_7|PF13176.2|0.1,TPR_19|PF14559.2|2.3e+03,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|73,TPR_19|PF14559.2|1.3e+03,TPR_19|PF14559.2|0.34,TPR_19|PF14559.2|1,TPR_19|PF14559.2|68,TPR_19|PF14559.2|0.027,TPR_17|PF13431.2|4.8e+02,TPR_17|PF13431.2|4.6e+03,TPR_17|PF13431.2|1.2e+04,TPR_17|PF13431.2|4.1e+03,TPR_17|PF13431.2|27,TPR_17|PF13431.2|0.035,TPR_17|PF13431.2|0.19,TPR_17|PF13431.2|4.6,TPR_17|PF13431.2|3e+02,TPR_16|PF13432.2|4.8e+02,TPR_16|PF13432.2|1.6e+03,TPR_16|PF13432.2|60,TPR_16|PF13432.2|1.9e+03,TPR_16|PF13432.2|0.00024,TPR_16|PF13432.2|19,TPR_16|PF13432.2|0.0078 R_Transcript_102367:70-1821(+)
MDSKETCRNEVRVAVRQLSNRGLYTASKWAAEQLLGIEQDPAKFTPSHTRFQRGSSSICRRFRTNDPTSTPSPSVSYVSTPVPEEDDDTIDTDFYLLAKSYFDCKEYRRAAHVLRDQTGRKAVFLRCYALYLAGEKRKEEEIIELEGPLGKSNIVNGELASLERELSTLRKRGGLDSFGLYLYGLVLKEKGNENLARALLVESVNSYPWNWSAWLALRSLCTTIDILNSLNLNNHWMKDFFFASAYEELRLHKESMEKYEHLQKTFSFSSYLQARKASVQYNLREFDQVEIIFEELLRNDPYRIEDMDMYSNVLYAKEAFSALSYLAHRVFLTDKYRPESCCIIGNYYSSKGQHEKSVMYFRRALKLDKNYLTAWTLMGHEFVEMKNTPAAVDAYRRAVDINPCDYRAWYGLGQAYEMMVMPLYALYYFRKSVSLQPNDARLWIAMAHCYESDQLHMFEEAIKCYKRAANCQDTEAIAVNRLAKLHDQLGHHAEAAFYYKKDLERMEVEEREGPNMVDALMFLARYYRAQERFEEAEIYCTRLLDYNGPEKETAKSLLRAMKMAQSGFPSLDVDHFPPFGSHS*

Click here to download the sequence:
Link to NCBI Protein BLAST