Transcript Information: R_Transcript_102376.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29922886811014
Replicate 20.51630246925323
Replicate 30.18776014423076
Condition 2: 8 Hour
Replicate 10.40140762208599
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.17940741546637


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_102376.p2 GENE.R_Transcript_102376~~R_Transcript_102376.p2 ORF type:complete len:122 (+),score=25.68,gag_pre-integrs|PF13976.2|3.5e-15 R_Transcript_102376:3-368(+)
ATGGGGCAGTTAGATGCCAGTAGGTATAGAACTGTGTTTAGTGACAACACTTGGAAGATTTCTAGGGGTGCAATGGTGATTGCACGGGGTTCCAAGGTGGTCACATTATACACTACTACAGGATGTGAGAACATAATTGCTGCAACCACAGGGGAAGAGGTCAAGCTTTGGCACAATAGGCTTGGCCACATGAGTGAGAAAGGGATGAAGATTATGGCTTCGAGGGGCAAACTTTCCAATGCGAAATCAGTCGATCTTGAGGTTTGTGAGAGTTGTGTGATGGGAAAGCAAAAGAGAGTGACTTTCACAAAGAACAAGAGAGAGTTGAGAAAGGAGAAGCTAGAGTTAGTGCACACTAATGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_102376.p2 GENE.R_Transcript_102376~~R_Transcript_102376.p2 ORF type:complete len:122 (+),score=25.68,gag_pre-integrs|PF13976.2|3.5e-15 R_Transcript_102376:3-368(+)
MGQLDASRYRTVFSDNTWKISRGAMVIARGSKVVTLYTTTGCENIIAATTGEEVKLWHNRLGHMSEKGMKIMASRGKLSNAKSVDLEVCESCVMGKQKRVTFTKNKRELRKEKLELVHTNV*

Click here to download the sequence:
Link to NCBI Protein BLAST