Transcript Information: R_Transcript_102435.p1


Annotated TAIR IDAT5G07580.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2399525-2400349 | Forward length=274
E-Value1.8E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.378600460236
Replicate 22.1239032213018
Replicate 32.7805866446197
Condition 2: 8 Hour
Replicate 15.6614716641029
Replicate 24.2007436984886
Replicate 35.4559754465903
Condition 3: 24 Hour
Replicate 12.3223215403747
Replicate 23.1234326174517
Replicate 33.5425186776481


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_102435.p1 GENE.R_Transcript_102435~~R_Transcript_102435.p1 ORF type:complete len:346 (+),score=68.57,AP2|PF00847.16|3.5e-08 R_Transcript_102435:997-2034(+)
ATGCCAGGGATTCAGAATCGTCCTGTGAAACAAGAGATGGGTTCAATCACTGAGAAAAAGAAGCATTGCTTGGAGAGTAGTAAGAGTCGAGTACCACAAAGAGTTCGTATTATATACACAGATCCTGATGCTACCGATTGTTCTAGTGACGAGGAGGACAATCAGAGGTGTACCACTTCAAGGATTTGCGTTGATGGCATCAAGCGATTGGTTAGGGAAGTTAAAGTTCACCATAACAGTGGAAACGCGAAGAAAGTTGATGTTAGTAAAGGTGGAAACAAACTGAAACTTGTTGGTAAAGGTGGAAACAAACTGAAACATGATGTTAAAGTCAGAAATAATCGAAGACCAGGGAGATCATCGTCGAAATACCCTGGTGTTAGGAGGCGACAGTGGGGGAAATGGGCGGCTGAAATTCGTGACCCTTTTCAAGTAGGTCGAAGGATATGGCTTGGTACTTTTCTTACTGAAGAAGCAGCTGCCTCAGCTTACCAGAGCAAGAAGCTCGAGTTTGATACTTTGTTACAAAAGGGGAAGAAGACATCAACCCCCCCTCGTAATTTGGCTGTGTCGATACCTCAGCCCTGTGATTCAGACGACACAAATACAAAGATGACTGGCTCTCAGTCATCTCCATCTTCTGTGCTTGACGTCTCCAACAAAAACCCGTTTGGAGCTCACCCTTCGGTTCCTCCTAGAACAGAGGATAATGAAGTTGTTTTTGGTATGGAAAATCACAATGCAGTGAGAAATCAGCAGGCTGAAGAAGCCCCGATTGGAAATACAGCATTAGAGGTTCCTCTGATCATGTCTTCTAATCAACAGGAGCTTAACTTGGCTTCTGCAAACCCCATCCCCCCTCCATTTGTGGGGAACAATTTTGAGTTCGAACACTTTTTGGATGATCTTAGGATGGATGATCTACCAATGTGCGATTTAACTGACATTGGGCCAATCGATATCCCCAACTTTGATATCGATTTTACTGGCGCTGAACTTTCCTGGATCGATGAAGCACTAAACACAGCTGGTCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_102435.p1 GENE.R_Transcript_102435~~R_Transcript_102435.p1 ORF type:complete len:346 (+),score=68.57,AP2|PF00847.16|3.5e-08 R_Transcript_102435:997-2034(+)
MPGIQNRPVKQEMGSITEKKKHCLESSKSRVPQRVRIIYTDPDATDCSSDEEDNQRCTTSRICVDGIKRLVREVKVHHNSGNAKKVDVSKGGNKLKLVGKGGNKLKHDVKVRNNRRPGRSSSKYPGVRRRQWGKWAAEIRDPFQVGRRIWLGTFLTEEAAASAYQSKKLEFDTLLQKGKKTSTPPRNLAVSIPQPCDSDDTNTKMTGSQSSPSSVLDVSNKNPFGAHPSVPPRTEDNEVVFGMENHNAVRNQQAEEAPIGNTALEVPLIMSSNQQELNLASANPIPPPFVGNNFEFEHFLDDLRMDDLPMCDLTDIGPIDIPNFDIDFTGAELSWIDEALNTAGL*

Click here to download the sequence:
Link to NCBI Protein BLAST