Transcript Information: R_Transcript_102622.p1


Annotated TAIR IDAT5G03450.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:858954-862238 | Reverse length=630
E-Value4E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3914439830664
Replicate 23.6612765850484
Replicate 33.423782843553
Condition 2: 8 Hour
Replicate 13.5726706862529
Replicate 23.1830436784606
Replicate 33.6174028282622
Condition 3: 24 Hour
Replicate 14.0033186980694
Replicate 24.7877964139687
Replicate 33.7388249998971


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_102622.p1 GENE.R_Transcript_102622~~R_Transcript_102622.p1 ORF type:5prime_partial len:281 (+),score=78.45,zf-RING_UBOX|PF13445.2|3.8e-09,zf-RING_2|PF13639.2|7.6e-09,zf-C3HC4_2|PF13923.2|2.8e-07,zf-C3HC4|PF00097.21|6.5e-07,zf-rbx1|PF12678.3|6e-06,zf-rbx1|PF12678.3|7.9e+02,zf-ANAPC11|PF12861.3|1.3e-05 R_Transcript_102622:3-845(+)
CACGATGAAGATGAAGATGAATTCGACGAAGATGAAGATGATGACGATGACTATGAAGATGAAGAAGATGAGGAAGAAGAAGAAGAAGAAGATGATGTGCAAGTACTGAATGAGATACCTCCTCAACCGTCGTCCCCTATTCCTGTTGCTGCTACGACGTCGTCTAGGGTTGAGGAGACAGAAGAGGATTTGAGTTTGATGGATTTTGAAAAGCATTATAGTCCGAAAGAAACGACTAGAGAAGAAATTGATGGCTTGTTTTGTCCTATTTGTATGGAGCCTTGGTCTAACGCCGGTGATCATCAACCTAGCTGTCTTGCTTGCGGGCATTTGTTTGGAATGTCTTGCATTAAAAAGTGGCTTGGTCAACGAAGAAACTCAGGGAAGTGCCCCCAATGCAACAAGAAGTGTACATTGAAGGATGTTAGGAGGATCTACGGGTCACAAGTAGTTGTAGTTGATGAAGAATCACAGAAGAGAATACGATTTCTTGAGGCTAAATGTAATGCTCTTCAGAAAAAGGATGAAGAATGGCGCAAGAAGGAAGTGGAGTGGCATATGAAAGTATTAGTTTGTCAGAAGAAAGAGACGGAGTTATGTCAGCAGTTACAGCAGCTTAATGAGAGGTCCAGCAACCTTGAGCGTACGCTAAAAGGCCTAGAAGGTAAACCACTGAGCTTAAGTGGTGCTGCTAATGGGTTTGATGGGCGATCGACTAGAGAGCACCAAGTTGGAAGAACTGCTACTCCACTATCTTCTTGTTCTTTTAAATTCCAGGAAGAGAGAAAAATGAAATCTTCAATGGATTGTGATCCGAACATTCCTCTGGTGATGCAATGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_102622.p1 GENE.R_Transcript_102622~~R_Transcript_102622.p1 ORF type:5prime_partial len:281 (+),score=78.45,zf-RING_UBOX|PF13445.2|3.8e-09,zf-RING_2|PF13639.2|7.6e-09,zf-C3HC4_2|PF13923.2|2.8e-07,zf-C3HC4|PF00097.21|6.5e-07,zf-rbx1|PF12678.3|6e-06,zf-rbx1|PF12678.3|7.9e+02,zf-ANAPC11|PF12861.3|1.3e-05 R_Transcript_102622:3-845(+)
HDEDEDEFDEDEDDDDDYEDEEDEEEEEEEDDVQVLNEIPPQPSSPIPVAATTSSRVEETEEDLSLMDFEKHYSPKETTREEIDGLFCPICMEPWSNAGDHQPSCLACGHLFGMSCIKKWLGQRRNSGKCPQCNKKCTLKDVRRIYGSQVVVVDEESQKRIRFLEAKCNALQKKDEEWRKKEVEWHMKVLVCQKKETELCQQLQQLNERSSNLERTLKGLEGKPLSLSGAANGFDGRSTREHQVGRTATPLSSCSFKFQEERKMKSSMDCDPNIPLVMQW*

Click here to download the sequence:
Link to NCBI Protein BLAST