Transcript Information: R_Transcript_102624.p1


Annotated TAIR IDAT5G03450.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:858954-862238 | Reverse length=630
E-Value1.3E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1792510373699
Replicate 26.330021377566
Replicate 37.8871633568301
Condition 2: 8 Hour
Replicate 15.8895161158119
Replicate 24.7889862262836
Replicate 38.1039315949339
Condition 3: 24 Hour
Replicate 19.2663307591228
Replicate 27.8119944999574
Replicate 39.62770535651


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_102624.p1 GENE.R_Transcript_102624~~R_Transcript_102624.p1 ORF type:5prime_partial len:607 (+),score=138.04,zf-RING_UBOX|PF13445.2|1.1e-08,zf-RING_2|PF13639.2|2.2e-08,zf-C3HC4_2|PF13923.2|8.3e-07,zf-C3HC4|PF00097.21|1.9e-06,zf-C3HC4_4|PF15227.2|3e-05 R_Transcript_102624:3-1823(+)
GAGCACGATGAAGATGAAGATGACTTCGACGAAGATGAAGATGAAGAAGATGATGACGATGACTATGAAGATGAAGAAGATGAGGAAGAAGAAGAAGAAGAAGATGATGTGCAAGTACTGAATGAGATACCTCCTCCTCCTCAACCGTCGTCCGCTAATCCTGTTCCTGTTGCTGCTACGGCGTCGTCTATGATTGAGGAGACAGAAGAGGATTTGAGTTTGATGGATTTTGAAAAGCATTATAGTCCGAAAGAAACGACTAGAGAAGAAATTGATGGCTTGTTTTGTCCTATTTGTATGGAGCCTTGGTCTAACGCCGGTGATCATCAACCTAGCTGTCTTGCTTGCGGGCATTTGTTTGGAATGTCTTGCATTAAAAAGTGGCTTGGTCAACGAAGAAACTCAGGGAAGTGCCCCCAATGCAACAAGAAGTGTACATTGAAGGATGTTAGGAGGATCTACGGGTCACAAGTAGTTGTAGTTGATGAAGAATCACAGAAGAGAATACGATTTCTTGAGGCTAAATGTAATGCTCTTCAGAAAAAGGATGAAGAATGGCGCAAGAAGGAAGTGGAGTGGCATATGAAAGTATTAGTTTGTCAGAAGAAAGAGACGGAGTTATGTCAGCAGTTACAGCAGCTTAATGAGAGGTCCAGCAACCTTGAGCGTACGCTAAAAGGCCTAGAAGGTAAACCACTGAGCTTAAGTGGTGCTGCTAATGGGTTTGATGGGCGATCGACTAGAGAGCACCAAGTTGGAAGAACTGCTACTCCACTATCTTGTGGTTCTTTTGAATTCCAGCAAGAGTTGCTCTTAAATGGTGCACGATATTTTGATGTGGATAAATCAGGACATGTTTTGATTATTGCTCGAAGACCTAATCAGATTGGTGGATCCCACAGTCTTACCAAAATGAGTTTACTTTCTCCTCGGGAACAATCGCATATGCAACTTCCTTCTTCAATCAAAGCAGTTAGGGATTTGCATTTTTCTTCTTTTGGTAGACTTGCACTGCTGGCTTCATTGGGGAAGAAATTATCGGTTGTAAGTATGGAAAGTAACAATATCGTTCTCAACTATGATTTACCGGCTGCTGCTTGGTCTTGTTCATGGGATATCAACAATCCACATTATGCTCATGCTGGATTACAGAACGGCATGCTTCTAGTGTTTGATTTGCGTCAAACTGCGAGGCCTTTGGAATCGAGGAACGGATTGACATGCAACCCTATACATACCATACTTTCTCTTTCAGATGATTCAACGGTTGATCCAAGAGTTACAAGGCTCCTCACTGCTTCTTCTGTTGGGTTGTGCGAGTGGAACATTGGTGGTGCAAATGAACAGCCTTCCTTGATTGCAGAGACAGTAAATCAAGGAGTTTGTATAGCCCTTGCTTCTGATTACGAGAATGTTGTTGCTACATTTCGCCCTAGAGTCGGGTTGCCTGATGAGATGGGCTCTCAACTGTCGCAAGTACCTTCCTGTAACATAGGGAGCTATGTTCAGGGTTCACATGTCTTCCTTGAGAGAACTGACTCTGGCTATGAAAAGTTGGGGTCAACTAGTGCGTATGTTCCTGGAATACGTCTCCCAAAATATGCTGTTTTAAGAGCTGGTGCTGAAAGCTCATTATTTGTTTCTGGAGATGAAACAACATCTAACTTGGTTTTGCAAGAGTTGCCCTCATTAGCAGAGACCCAGCGCCTTAAATCTCATTATCCTATTCGTGATGTGAAGTACATCTCTTCTCAGAAACCGGGTTTACTTTGCTGCTTAAGCGAGGACAAAATGCAGTTCTTCACTCACAATCAATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_102624.p1 GENE.R_Transcript_102624~~R_Transcript_102624.p1 ORF type:5prime_partial len:607 (+),score=138.04,zf-RING_UBOX|PF13445.2|1.1e-08,zf-RING_2|PF13639.2|2.2e-08,zf-C3HC4_2|PF13923.2|8.3e-07,zf-C3HC4|PF00097.21|1.9e-06,zf-C3HC4_4|PF15227.2|3e-05 R_Transcript_102624:3-1823(+)
EHDEDEDDFDEDEDEEDDDDDYEDEEDEEEEEEEDDVQVLNEIPPPPQPSSANPVPVAATASSMIEETEEDLSLMDFEKHYSPKETTREEIDGLFCPICMEPWSNAGDHQPSCLACGHLFGMSCIKKWLGQRRNSGKCPQCNKKCTLKDVRRIYGSQVVVVDEESQKRIRFLEAKCNALQKKDEEWRKKEVEWHMKVLVCQKKETELCQQLQQLNERSSNLERTLKGLEGKPLSLSGAANGFDGRSTREHQVGRTATPLSCGSFEFQQELLLNGARYFDVDKSGHVLIIARRPNQIGGSHSLTKMSLLSPREQSHMQLPSSIKAVRDLHFSSFGRLALLASLGKKLSVVSMESNNIVLNYDLPAAAWSCSWDINNPHYAHAGLQNGMLLVFDLRQTARPLESRNGLTCNPIHTILSLSDDSTVDPRVTRLLTASSVGLCEWNIGGANEQPSLIAETVNQGVCIALASDYENVVATFRPRVGLPDEMGSQLSQVPSCNIGSYVQGSHVFLERTDSGYEKLGSTSAYVPGIRLPKYAVLRAGAESSLFVSGDETTSNLVLQELPSLAETQRLKSHYPIRDVKYISSQKPGLLCCLSEDKMQFFTHNQF*

Click here to download the sequence:
Link to NCBI Protein BLAST