Transcript Information: R_Transcript_10270.p1


Annotated TAIR IDAT3G18790.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like splicing (InterPro:IPR009360); Has 1147 Blast hits to 965 proteins in 236 species: Archae - 12; Bacteria - 13; Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other Eukaryotes - 483 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6477853-6478755 | Forward length=300
E-Value2.7E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.380474557072
Replicate 235.177408238454
Replicate 336.876092326921
Condition 2: 8 Hour
Replicate 146.804128735226
Replicate 255.572289952848
Replicate 354.335804906273
Condition 3: 24 Hour
Replicate 157.507425317921
Replicate 246.352199832328
Replicate 343.560120475235


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10270.p1 GENE.R_Transcript_10270~~R_Transcript_10270.p1 ORF type:complete len:305 (+),score=77.15,Isy1|PF06246.8|7.4e-93 R_Transcript_10270:239-1153(+)
ATGGCGCGAAACGAGGAGAAAGCCCAGTCTATGCTGAATCGGTTCATAACGATGAAGCAAGAGGAGCAGAAGAAGCCCAAAGAGCGTCGTCCTTACTTAGCCTCCGAGTGCCGAGACCTCGCCGAAGCTGACAAATGGCGCCAACAAATCATGCGAGAAATCGGCCGGAAAGTCGCCGAGATCCAAAACGAGGGTTTAGGCGAACACCGTCTTCGAGACCTGAACGACGAGATCAACAAACTCATTCGAGAGAAGTCTCATTGGGAGCGTCGAATTGTCGAGCTTGGTGGCCCTAATTACTCCAAACATTCCGCTAAGATGACCGATTTAGAAGGCAACATTGTCGATGTCCCTAACCCTAGCGGTCGAGGTCCAGGGTACCGGTACTTCGGGGCGGCGAAGAAGTTGCCTGGTGTGAGAGAATTGTTTGAGAAGCCGCCTGAGCTGAGAAAGAGACGAACCAGATACGATATTTATAAGAGGATTGATGCCAGTTATTATGGTTACAGGGATGATGAGGACGGTGTTTTGGTGAAGCTGGAGGGTCCCGCCGAGGAGAAGATGAGGGCAGAGGCGTTGGCGGAGTGGAATTTGATGGAGGAGATTAAGAGTGAGGCTAGGAAGGCTGTTAAGAGCGGTGAGGTGGCAAGCGTGACGAGTGTGGATGTGAAGGGGATTTTGTTTGAGGAGGAAGAGGAGGTGGTGGAGGAAGAAAGGAGGAAAGAGAAGGAGAGGGAAGAAGAGGAGGAGTCGAAGAGGAAGGAGTTTGTTGTGCACGTGCCGTTGCCTGATGAGAAGGAGATTGAGAGGATGGTTGTTGAGAAAAAGAAGATGGAGCTCTTGAGTAAGTATACGAGTGAGAATTTGCTCGAGGAGCAGTTGGAGGCTAAGGCTTTGTTGAATATCCAGAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10270.p1 GENE.R_Transcript_10270~~R_Transcript_10270.p1 ORF type:complete len:305 (+),score=77.15,Isy1|PF06246.8|7.4e-93 R_Transcript_10270:239-1153(+)
MARNEEKAQSMLNRFITMKQEEQKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNYSKHSAKMTDLEGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLVKLEGPAEEKMRAEALAEWNLMEEIKSEARKAVKSGEVASVTSVDVKGILFEEEEEVVEEERRKEKEREEEEESKRKEFVVHVPLPDEKEIERMVVEKKKMELLSKYTSENLLEEQLEAKALLNIQR*

Click here to download the sequence:
Link to NCBI Protein BLAST