Transcript Information: R_Transcript_102708.p1


Annotated TAIR IDAT5G65380.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26123241-26126352 | Reverse length=486
E-Value1.7E-251
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.548555464107
Replicate 215.980989790543
Replicate 314.189193733649
Condition 2: 8 Hour
Replicate 117.695250579285
Replicate 221.500847924217
Replicate 323.001838559438
Condition 3: 24 Hour
Replicate 128.209289447807
Replicate 224.198279997354
Replicate 324.76766582991


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_102708.p1 GENE.R_Transcript_102708~~R_Transcript_102708.p1 ORF type:complete len:494 (+),score=42.85,MatE|PF01554.14|1.6e-28,MatE|PF01554.14|8.8e+03,MatE|PF01554.14|5.8e-27 R_Transcript_102708:326-1807(+)
ATGTCGAGTGACAAAATCTGCAATTATAAATGGAAAGAGCAAAAAGTTCCCTTACTAGAAAGCTATAAATCTGATGAAGAGTTTGGGGATGGAGTCGAAGAAGGAAGTCTAGTAAAGAGGGTGTGGATTGAATCCAAGAAGCTATGGCATATTGTTGGGCCTTCTATCATAAGTCGTGTGGCCTCCTACAGTATGTTGGTCATCACCCAAGCTTTCGCCGGCCACCTTGGTGACCTTGAGCTTGCCTCCATCTCCATCGCTACCAATGTTATCGTCGGCCTTGATTTTGGCCTCCTGTTGGGTATGGCAAGTGCACTGGAGACACTATGTGGGCAAGCATTCGGAGCAAAAAAGTACTACATGTTAGGGGTTTATATGCAACGATCATGGATAGTATTATTCGCGTGTTGTATTTTGTTATTACCGCTATACATATTCGCATCTCCAATGTTGAAATTATTGGGTCAGCCAGAGGACGTGGCAGAGATGACAGGGATGGTGTCACTATGGATGTTGCCACTTCACTTTAGCTTTGCCTTCCAATTCCCATTGCAAAGGTTCCTACAATGCCAGCTAAAGACTGGAATCATAGCTTGGGTTTCGGTGCTCGGATTGATCGTTCAGATGTTCGTCACATGGTTGTTCGTGGTGGTGCTCAAGTGTGGTGTAATTGGAGTTGCGGTTACTCAGAATTTTGCCTGGTGGGTGTTGGTTTTTGGCCTGTTTTCATATACTGTTGGAGGTGGCTGTCCTGACACTTGGTGTGGCTTCTCCATGGAAGCCTTTTCTGGTCTTTGGGAATTTGTCAAACTCTCTGCTGCCTCTGGTGTCATGCTCTGCTTGGAGAACTGGTACTACAAAGTATTGATATTAATGACTGGAAACCTGAAAAATGCGGAGATAGCATTGGACGCTTTGTCTATTTGCATGAGCATCAACGGGTGGGAAATGATGATTCCCTTCGCCTTCTTTGCAGGGGCCGGAGTAAGAGTAGCAAATGAGCTGGGAGCAGGGAACGGAAAAGGAGCAAAATTCGCAACGACAGTAGCAGTTTTGACGTCCGTAGCAATTGGGCTCGTCTTCTGGCTGCTAATACTCATTCTTCACGACAAGTTTGCATTCATTTTCTCCACGAGTGAACCCGTTGTTGAAGAAGTTAACAAGCTCTCCTTTCTCTTAGCCTTCACCATCCTCCTTAACAGCGTTCAACCTGTTCTCTCTGGCGTCGCGGTTGGATCAGGATGGCAAACTACGGTGGCTTATGTAAATATAGGTTGCTACTATTTGCTAGGTGTTCCTCTTGGTTTTTTGATGGGATGGAAGTTTGATCAAGGAGTTATGGGAATATGGGCAGGAATGATTTTTGGGGGAACAGCAGTTCAAACACTAATTTTGATATATCTTACAGTTCGGTGTGATTGGGAGAAAGAGGCCCAAAAAGCATGGGTGCACCTTCTAAAATGGACTGACGATAGAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_102708.p1 GENE.R_Transcript_102708~~R_Transcript_102708.p1 ORF type:complete len:494 (+),score=42.85,MatE|PF01554.14|1.6e-28,MatE|PF01554.14|8.8e+03,MatE|PF01554.14|5.8e-27 R_Transcript_102708:326-1807(+)
MSSDKICNYKWKEQKVPLLESYKSDEEFGDGVEEGSLVKRVWIESKKLWHIVGPSIISRVASYSMLVITQAFAGHLGDLELASISIATNVIVGLDFGLLLGMASALETLCGQAFGAKKYYMLGVYMQRSWIVLFACCILLLPLYIFASPMLKLLGQPEDVAEMTGMVSLWMLPLHFSFAFQFPLQRFLQCQLKTGIIAWVSVLGLIVQMFVTWLFVVVLKCGVIGVAVTQNFAWWVLVFGLFSYTVGGGCPDTWCGFSMEAFSGLWEFVKLSAASGVMLCLENWYYKVLILMTGNLKNAEIALDALSICMSINGWEMMIPFAFFAGAGVRVANELGAGNGKGAKFATTVAVLTSVAIGLVFWLLILILHDKFAFIFSTSEPVVEEVNKLSFLLAFTILLNSVQPVLSGVAVGSGWQTTVAYVNIGCYYLLGVPLGFLMGWKFDQGVMGIWAGMIFGGTAVQTLILIYLTVRCDWEKEAQKAWVHLLKWTDDRD*

Click here to download the sequence:
Link to NCBI Protein BLAST