Transcript Information: R_Transcript_102842.p1


Annotated TAIR IDAT5G61330.1
Annotated Gene NamerRNA processing protein-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24657287-24660103 | Reverse length=436
E-Value2.6E-140
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.772619876963
Replicate 214.516580909833
Replicate 315.673030986841
Condition 2: 8 Hour
Replicate 114.351762947548
Replicate 216.155469655593
Replicate 320.496555533068
Condition 3: 24 Hour
Replicate 123.397191098091
Replicate 220.366818018571
Replicate 324.977117549402


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_102842.p1 GENE.R_Transcript_102842~~R_Transcript_102842.p1 ORF type:5prime_partial len:418 (+),score=120.17,AATF-Che1|PF13339.2|58,AATF-Che1|PF13339.2|1.7e-28,AATF-Che1|PF13339.2|3.1e+02,TRAUB|PF08164.8|3.7e+03,TRAUB|PF08164.8|1.2e-21 R_Transcript_102842:2-1255(+)
CTGAAAATGGGTTCTTTCCGAAAGGGACTGAAAAGAGCTCAGCCGAGCTACAGTGAATCCGGTTCTGAAGAAGAAGAAGATGAATTTGAGGATGAGGTCGCTGGAGAAGAAGAATTCAGCGGCTCTGATGATTATTCCGGTGAGGAGGATGACGACGATCAGAGTAACAGAGACGAAGACGAACACGAAGAAGAAGATGAAGACCAAGATGAAGATGAAGAATCTGATGATGATGATGGAGCTAAGGTGAATAACGTTGGAAAATTTGACGAAATGGAGGAACTGGAGAAAGAGTACAAGGAACTTCGAAACCAGGAGCAAAGTTTAGTACAAAATTTGAAGCGACACAAGGATGAAGATCTTGTTAAGGGACAGGCAATCAAGAACCAAAAGGCTTTGTGGGATAAGGCCCTTGAGCTCAGAATCTGTTTGCAGAAAGCATTCTGCATAACAAACAAGCTACCGCAGGAGCCGGTTCGATCATTATTCTGTGAGTCAGATGATGGGGTATCGGCTGTATATTCAGATCTCATTGATTCATCTAAGAAGGCAATAGATTCCCTAGTCCAATTACAAGAGGCTTTAACTGACAATAATCCATCAGTTGCTGAAGCCAGAGAAGAAGGGGAATCTCAATCGTCTGTTAAATCCTCTGGTGAGTTTGACAAGGAGGAAGAGTGGGCACATATATCTCAAATGCAATCAAGATTAGCACCTTTTAGAAACACGGCAATAGATAAGTGGCAGAGGAAAGCTGATGTTCATAGTGGTGCTGCAGCAAAAAAGGCGAAATTATTAGCTTTTAACCAGAATATAAGTGATCAAGTTCCGACATACATGAGGGATCCAAGTAAAATGATCCGGAGTATGCAAACAAAAAGAGAGGAAATTGGTGTCTTTGGCTTTGTTCCTCCGCAAGTTGGGGATGGCAAGGAGGAGGGAAATGTTGAGGGTGACCCAGAGCTTCTGGATGACTCTGAGTTTTACCGGCAGCTGCTGAAAGAATTCTTGGAGGCATCTGACTTAACATCTCACTTAATGTCTTCTGAGTCGGCATATGATGCTAACAAGAAGAAAAGAAAAAGAAAGGATGTTGATCGACGAGCCTCCAAGAGCCGCAAGATCAGGTATAATGTCCATGAAAAGATTGTCAATTTCATGGCTCCACAACCAATGGACCTTCCCCCAATGGCGCCCAAGTTATTCGAGAATTTGTTTGGGTTGAAAACTCAGAAAGCTACATCAGCTGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_102842.p1 GENE.R_Transcript_102842~~R_Transcript_102842.p1 ORF type:5prime_partial len:418 (+),score=120.17,AATF-Che1|PF13339.2|58,AATF-Che1|PF13339.2|1.7e-28,AATF-Che1|PF13339.2|3.1e+02,TRAUB|PF08164.8|3.7e+03,TRAUB|PF08164.8|1.2e-21 R_Transcript_102842:2-1255(+)
LKMGSFRKGLKRAQPSYSESGSEEEEDEFEDEVAGEEEFSGSDDYSGEEDDDDQSNRDEDEHEEEDEDQDEDEESDDDDGAKVNNVGKFDEMEELEKEYKELRNQEQSLVQNLKRHKDEDLVKGQAIKNQKALWDKALELRICLQKAFCITNKLPQEPVRSLFCESDDGVSAVYSDLIDSSKKAIDSLVQLQEALTDNNPSVAEAREEGESQSSVKSSGEFDKEEEWAHISQMQSRLAPFRNTAIDKWQRKADVHSGAAAKKAKLLAFNQNISDQVPTYMRDPSKMIRSMQTKREEIGVFGFVPPQVGDGKEEGNVEGDPELLDDSEFYRQLLKEFLEASDLTSHLMSSESAYDANKKKRKRKDVDRRASKSRKIRYNVHEKIVNFMAPQPMDLPPMAPKLFENLFGLKTQKATSAA*

Click here to download the sequence:
Link to NCBI Protein BLAST