Transcript Information: R_Transcript_103005.p1


Annotated TAIR IDAT3G12610.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)DRT100
Annotation TypeOrtholog
Chromosome Positionchr3:4006661-4007779 | Reverse length=372
E-Value3.4E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9692115554621
Replicate 24.3695003569053
Replicate 36.5005606691784
Condition 2: 8 Hour
Replicate 14.1692148423688
Replicate 23.1426104209234
Replicate 32.5019787611885
Condition 3: 24 Hour
Replicate 15.3361389772501
Replicate 24.4706605859278
Replicate 36.7437792819089


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_103005.p1 GENE.R_Transcript_103005~~R_Transcript_103005.p1 ORF type:complete len:370 (+),score=21.25,LRR_8|PF13855.2|1.2e-10,LRR_8|PF13855.2|2.2e-05,LRR_8|PF13855.2|1.2e-05,LRR_8|PF13855.2|4.3e+03,LRR_1|PF00560.29|5.1e+03,LRR_1|PF00560.29|1.3e+04,LRR_1|PF00560.29|0.76,LRR_1|PF00560.29|0.61,LRR_1|PF00560.29|0.029,LRR_1|PF00560.29|4.3e+02,LRR_1|PF00560.29|3.4e+02,LRR_1|PF00560.29|16,LRR_1|PF00560.29|39,LRR_1|PF00560.29|1.6e+02,LRR_1|PF00560.29|2.4,LRRNT_2|PF08263.8|2.4e-12,LRRNT_2|PF08263.8|9.8e+03,LRR_4|PF12799.3|7.8e+02,LRR_4|PF12799.3|0.29,LRR_4|PF12799.3|0.00024,LRR_4|PF12799.3|0.0049,LRR_4|PF12799.3|0.061,LRR_4|PF12799.3|2.2,LRR_4|PF12799.3|89 R_Transcript_103005:71-1180(+)
ATGATGATAATGAAGGGGTTGTTAGCGGTTGTGCTAGTATACTCAGTGACACAGACACTAGTAGCTGTGGTGAAATGCTGTAGCCCATCAGACAGGGCAGCTCTGCTCTCCATAAAGTCTTCCCTAAATGAGCCTTACTTAGGCATCCTCGACTCCTGGTCTGGCACTGACTGCTGCACCAACTGGTACGGTGTCCACTGCAACCCCGACACAGGCCGTGTCACCGACTTCAACCTCCGTGGCGAGTCTCAGGACCCAATCCTCCGTAATTGTGGTGGCTCCATGACTGGCTCCATTTCTCCCGACATCTGTAACCTCGACGCTCTCACCAACCTCGTCATCGCCGACTGGAAAGGTATCTCCGGCCAAATCCCATCCTGCATACCCTCCTCTCTCTCCAGCCTCCACGTCATCGACCTCACTGGGAACCGTCTCACTGGTCCCATCCCTTCCGACATTGGAAACCTCCAGAACCTTCGTATCCTCAACCTTGCCGACAACCTCATTTCGGGGCCCATCCCTTCTTCAATTACTAACCTCGCCTCTCTGACCCACCTCGATCTCAGAGGCAACCAGATAACAGGTCTAATCCCTTCTGACATGGGCAAGCTTAGCAAGCTCAGCCGAGCCTTGCTTAGCCGTAACCAGCTCACCGGGCCCATCCCAACCTCGATCAGCTGCATGAACCGCCTTGCTGACCTGGATTTATCCACAAACCGCCTCTCCGGTTCTATCCCCGAGCAGCTGGGGAAAATGCCGGTCCTGGCGACGTTGAATTTGGACAGCAATGGGCTGACCGGGTCCATACCGGCCTCACTATTGAGTGACATTGGGCTCAACATATTGAATTTGAGCAGGAATGGACTTGAAGGGTATATTCCGGATGTGTTCGGGGCAAAATCGTACTTTAGTGCGCTGGATTTGTCGTACAACAAGCTCAAGGGGTCTGTTCCGTCGTCGTTGGGGACAGCGGGTTATGTGGGCCACTTGGATTTGAGCCACAACCATCTTTGTGGGTCCATCCCTAGCGGTAATCTCTTTGATCGCCTTGATGCGGCGTCGTTTGCCAACAATGACTGCCTCTGTGGGACTCCCCTCAGGACTTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_103005.p1 GENE.R_Transcript_103005~~R_Transcript_103005.p1 ORF type:complete len:370 (+),score=21.25,LRR_8|PF13855.2|1.2e-10,LRR_8|PF13855.2|2.2e-05,LRR_8|PF13855.2|1.2e-05,LRR_8|PF13855.2|4.3e+03,LRR_1|PF00560.29|5.1e+03,LRR_1|PF00560.29|1.3e+04,LRR_1|PF00560.29|0.76,LRR_1|PF00560.29|0.61,LRR_1|PF00560.29|0.029,LRR_1|PF00560.29|4.3e+02,LRR_1|PF00560.29|3.4e+02,LRR_1|PF00560.29|16,LRR_1|PF00560.29|39,LRR_1|PF00560.29|1.6e+02,LRR_1|PF00560.29|2.4,LRRNT_2|PF08263.8|2.4e-12,LRRNT_2|PF08263.8|9.8e+03,LRR_4|PF12799.3|7.8e+02,LRR_4|PF12799.3|0.29,LRR_4|PF12799.3|0.00024,LRR_4|PF12799.3|0.0049,LRR_4|PF12799.3|0.061,LRR_4|PF12799.3|2.2,LRR_4|PF12799.3|89 R_Transcript_103005:71-1180(+)
MMIMKGLLAVVLVYSVTQTLVAVVKCCSPSDRAALLSIKSSLNEPYLGILDSWSGTDCCTNWYGVHCNPDTGRVTDFNLRGESQDPILRNCGGSMTGSISPDICNLDALTNLVIADWKGISGQIPSCIPSSLSSLHVIDLTGNRLTGPIPSDIGNLQNLRILNLADNLISGPIPSSITNLASLTHLDLRGNQITGLIPSDMGKLSKLSRALLSRNQLTGPIPTSISCMNRLADLDLSTNRLSGSIPEQLGKMPVLATLNLDSNGLTGSIPASLLSDIGLNILNLSRNGLEGYIPDVFGAKSYFSALDLSYNKLKGSVPSSLGTAGYVGHLDLSHNHLCGSIPSGNLFDRLDAASFANNDCLCGTPLRTC*

Click here to download the sequence:
Link to NCBI Protein BLAST