Transcript Information: R_Transcript_103041.p1


Annotated TAIR IDAT5G67570.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)EMB246, DG1, EMB1408
Annotation TypeHomolog
Chromosome Positionchr5:26952352-26955480 | Forward length=798
E-Value2E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.076730160928
Replicate 21.6303945399019
Replicate 32.5162704177592
Condition 2: 8 Hour
Replicate 12.782484653096
Replicate 23.0915613151639
Replicate 33.6440733442444
Condition 3: 24 Hour
Replicate 13.0001679899841
Replicate 22.7569073613222
Replicate 32.6116011274139


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_103041.p1 GENE.R_Transcript_103041~~R_Transcript_103041.p1 ORF type:3prime_partial len:528 (+),score=119.23,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|0.003,PPR_2|PF13041.2|6.3e-05,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|7.7,PPR_2|PF13041.2|0.75,PPR_2|PF13041.2|0.066,PPR_2|PF13041.2|58,PPR|PF01535.16|13,PPR|PF01535.16|1.4,PPR|PF01535.16|1.3,PPR|PF01535.16|0.0059,PPR|PF01535.16|74,PPR|PF01535.16|25,PPR|PF01535.16|0.0054,PPR|PF01535.16|2.5e+02,PPR_3|PF13812.2|7.8e+02,PPR_3|PF13812.2|0.0097,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.52,PPR_3|PF13812.2|9.9e+02,PPR_3|PF13812.2|2.4e+02,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|49,PPR_3|PF13812.2|3.8e+03,PPR_1|PF12854.3|40,PPR_1|PF12854.3|0.025,PPR_1|PF12854.3|98,PPR_1|PF12854.3|6.2e+02,PPR_1|PF12854.3|33 R_Transcript_103041:1100-2680(+)
ATGGCCGCTTACCACAGTATTGCTGTTACTCTTGGTCAAGCTGGAATGGTGAGGGAGTTGTTAAGGGTCATTGAATGTATGAAGGAGAAGCCTTCTCGGACAATTAAGAATATGCACCAGAAGAACTGGGATCCCACGCTTCAACCTGATATTGTTGTATTTAATTCTGTACTGAATGCTTGTGTTCCATCTCATCAGTGGAAGGGGGTTTCATGGGTTTTTGAGCAACTGAGGAAGGGTGGTTTGAGAGCTAATGGTGCTACATATGGACTTGCAATGGAGGTAATGCTACATTCTGAGAAGTATGATCTTGTTCATGAGCTGTTTCAAAAAATGAAAAGAAGTGGGGAGTCGCCAAAAGCTCTTACATACAAAGTTCTGGTGAGAACTTTTTGGAAGGAGAATAAAGTTGAGGAAGCCATCCGTACAGTAAGGGAGATGGAACAAAGGGGAATAATCGGATCAGCCAGCGTGTACTATGAACTAGCATGCTGCCTTTGCAACAAGGGAAGATGGCAAGAAGCAATGGCCGAGATTGAGAAGCTGAAAAGGCTAAGGCACTCGAAACCGCTGGTGGTTGCCTTCACTGGCATGATACTATCTTCTATGGATGGAGGACATGTAAATGATTGTGTGTCAATTTTTGAGCACATGCAAGACCATTGTGCTCCTAACATCGGGACTGTTAATGCAATGCTCAAGGTTTACAGTCGCAATGACATGTTCTTAGAGGCCAAGGACTTCTTTGAGAGCGTCAAAAGAGCAATGGCTGGATGCGGGGCTTGTCTTGGCAATGGCAACGCTACCCTTATTCCTGATGTATATATGTTTGTCTCAATGCTTGAAGCATCTAGTCGCGCTCATCAATGGGAATATTTTGAATATGTGTACAAGGAAATGTGTATATCTGGATACCAGCTTGATCAGGGTAAACATGCATTTCTACTTGTGGAAGCATCAAAATCTGGAAAGTGGCATTTGCTGGAGCATGCTTTTGACGCAATTTTGGAGGCTGGAGAAATCCCGCATCCCACTCTGTTCTCTGAAATGGTTCTTCAGGCCATGATCCAGGATGATTATGGAAAGGCTGCTACAATTGTGAATGCAATGGCCCATGCCCCCTTTCAATTGAATATGTTAGATTGGACGGGTCTTTTCAAGAAGAATAAAGATAGGATCAGTGACGAACACCTGAAGAAGTTATCATATAGTCTTTGTAATCGTGACATTCCAGAACGATCCTCAGTCTCAGAGCTGCTCAAAGCATTGGATTCTATTTGTGGGAGCATTCAATCTAGCAGTAGATGTACTGAGAATTCATCAATTGTAAGTTTCCGCAACAATGGTGCTATCTGTGATTCATATGTTGCCCCAGATGCAGATATCTATGGGGCAAATGGCGTCTATGCCACTGGAGATCAAGAATTGCATGATGATGACTCTGATTGGGATAAAGGATCTCTCAGTCGATCTAATGAAGGGGAGGATGGTACCGATGACTTGCATGCCCTCTGTCCTAGCTGTGATTTTGATGATTATCCTAGCTCGTCCGATGAATATGATGATTGTTTTGATGAGCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_103041.p1 GENE.R_Transcript_103041~~R_Transcript_103041.p1 ORF type:3prime_partial len:528 (+),score=119.23,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|0.003,PPR_2|PF13041.2|6.3e-05,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|7.7,PPR_2|PF13041.2|0.75,PPR_2|PF13041.2|0.066,PPR_2|PF13041.2|58,PPR|PF01535.16|13,PPR|PF01535.16|1.4,PPR|PF01535.16|1.3,PPR|PF01535.16|0.0059,PPR|PF01535.16|74,PPR|PF01535.16|25,PPR|PF01535.16|0.0054,PPR|PF01535.16|2.5e+02,PPR_3|PF13812.2|7.8e+02,PPR_3|PF13812.2|0.0097,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.52,PPR_3|PF13812.2|9.9e+02,PPR_3|PF13812.2|2.4e+02,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|49,PPR_3|PF13812.2|3.8e+03,PPR_1|PF12854.3|40,PPR_1|PF12854.3|0.025,PPR_1|PF12854.3|98,PPR_1|PF12854.3|6.2e+02,PPR_1|PF12854.3|33 R_Transcript_103041:1100-2680(+)
MAAYHSIAVTLGQAGMVRELLRVIECMKEKPSRTIKNMHQKNWDPTLQPDIVVFNSVLNACVPSHQWKGVSWVFEQLRKGGLRANGATYGLAMEVMLHSEKYDLVHELFQKMKRSGESPKALTYKVLVRTFWKENKVEEAIRTVREMEQRGIIGSASVYYELACCLCNKGRWQEAMAEIEKLKRLRHSKPLVVAFTGMILSSMDGGHVNDCVSIFEHMQDHCAPNIGTVNAMLKVYSRNDMFLEAKDFFESVKRAMAGCGACLGNGNATLIPDVYMFVSMLEASSRAHQWEYFEYVYKEMCISGYQLDQGKHAFLLVEASKSGKWHLLEHAFDAILEAGEIPHPTLFSEMVLQAMIQDDYGKAATIVNAMAHAPFQLNMLDWTGLFKKNKDRISDEHLKKLSYSLCNRDIPERSSVSELLKALDSICGSIQSSSRCTENSSIVSFRNNGAICDSYVAPDADIYGANGVYATGDQELHDDDSDWDKGSLSRSNEGEDGTDDLHALCPSCDFDDYPSSSDEYDDCFDEH

Click here to download the sequence:
Link to NCBI Protein BLAST