Transcript Information: R_Transcript_103042.p1


Annotated TAIR IDAT5G67570.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)EMB246, DG1, EMB1408
Annotation TypeOrtholog
Chromosome Positionchr5:26952352-26955480 | Forward length=798
E-Value3.3E-230
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0348558801434
Replicate 21.0131326324004
Replicate 31.6770323697682
Condition 2: 8 Hour
Replicate 11.548191128112
Replicate 22.381192076266
Replicate 33.3222581834319
Condition 3: 24 Hour
Replicate 13.3615424892479
Replicate 21.5412992901901
Replicate 32.2943850170957


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_103042.p1 GENE.R_Transcript_103042~~R_Transcript_103042.p1 ORF type:complete len:601 (+),score=133.72,PPR_2|PF13041.2|7.7e+03,PPR_2|PF13041.2|4.9e+03,PPR_2|PF13041.2|0.21,PPR_2|PF13041.2|1.9e+03,PPR_2|PF13041.2|0.0038,PPR_2|PF13041.2|7.4e-05,PPR_2|PF13041.2|0.36,PPR_2|PF13041.2|8.1,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|0.076,PPR_2|PF13041.2|5e+03,PPR|PF01535.16|3.4e+03,PPR|PF01535.16|0.021,PPR|PF01535.16|16,PPR|PF01535.16|1.6,PPR|PF01535.16|1.5,PPR|PF01535.16|0.0069,PPR|PF01535.16|87,PPR|PF01535.16|29,PPR|PF01535.16|0.0064,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.044,PPR_3|PF13812.2|9.1e+02,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|23,PPR_3|PF13812.2|0.61,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|1.6e+03,PPR_1|PF12854.3|8.5e+03,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|46,PPR_1|PF12854.3|0.03,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|7.2e+02,PPR_1|PF12854.3|39 R_Transcript_103042:121-1923(+)
ATGGATGCCCCAGCTAGACCTCAGGCACTCCCAAACTCCCCTTCAGTCGACCCACTAACCGAGAAAATCAAACAAAGACTTGTAAAGAAAGGGGTCACCCCAACTCCCAAAATCATTCACAATCTCCGCAAAAAAGAGCTCCAGAAATCCCTTCGCAAGTCCAGACGCCTTGCCTCTCAATCACCACCTGAACCTCTCACCTCCTCCCAGAAGAAAACTTTATCTGAAGAATTTTATTTTCAAACCATATCTAAGGAATATAAAGATTTCACCAAAGCCCTTGATACAAACTCCAAAGGCTTAAACTTGGTGGGAAAGCCTTGGGAACCACTTGAACTTGAGAAAATGAGGGAATTGGTTAGTGGGTTTGAAGGGAAAGATGCAGTTGTTGGTGGGAATTTGAAGTCTGAGCATTTGAGGGAACTGGGTTCGCTTTTTCAAGAAAGAAAGATTGAATCTTTGTCTTCATTTTTGGATGATGACATTGAACTTGAAGAGGGCATGTTGGAGGGTGATAGTGTAAGTGGTTCACCCATTCGGCGCCGTGTTAGTGATGCTCAGGCGATTCGGATTCTTGTTGACAGGCTTAGTGCACGTGAGATAACTATGAAAGATTGGAAATTTACAAGGATGATGAAGCAGTCAAGATTGCAATTTACAGAAGGACAGTTGCTTAAAATTGTTGGAGGGCTTGGTGATAGGGGGTGTTGGAAACAGGCCATGCAGGTTGTGGATTGGGTGTATAGCAGAAAAGAACAGACTCATTACAAAAGCAGGTTTGTGTACACAAAACTCCTTGCAGTTCTTGGAAAGGCAAGAAGGCCCCAGGAAGCTCTTCATGTTTTAAAGCGAATGCGTGGGGACTGTCACATCTATCCTGACATGGCGGCTTACCACAGTATTGCTGTTACTCTTGGTCAAGCTGGAATGGTGAGGGAGTTGTTAAGGGTCATTGAATGTATGAAGGAGAAGCCTTCTCGGACAATTAAGAATATGCACCAGAAGAACTGGGATCCCACGCTTCAACCTGATATTGTTGTATTTAATTCTGTACTGAATGCTTGTGTTCCATCTCATCAGTGGAAGGGGGTTTCATGGGTTTTTGAGCAACTGAGGAAGGGTGGTTTGAGAGCTAATGGTGCTACATATGGACTTGCAATGGAGGTAATGCTACATTCTGAGAAGTATGATCTTGTTCATGAGCTGTTTCAAAAAATGAAAAGAAGTGGGGAGTCGCCAAAAGCTCTTACATACAAAGTTCTGGTGAGAACTTTTTGGAAGGAGAATAAAGTTGAGGAAGCCATCCGTACAGTAAGGGAGATGGAACAAAGGGGAATAATCGGATCAGCCAGCGTGTACTATGAACTAGCATGCTGCCTTTGCAACAAGGGAAGATGGCAAGAAGCAATGGCCGAGATTGAGAAGCTGAAAAGGCTAAGGCACTCGAAACCGCTGGTGGTTGCCTTCACTGGCATGATACTATCTTCTATGGATGGAGGACATGTAAATGATTGTGTGTCAATTTTTGAGCACATGCAAGACCATTGTGCTCCTAACATCGGGACTGTTAATGCAATGCTCAAGGTTTACAGTCGCAATGACATGTTCTTAGAGGCCAAGGACTTCTTTGAGAGCGTCAAAAGAGCAATGGCTGGATGCGGGGCTTGTCTTGGCAATGGCAACGCTACCCTTATTCCTGATGTATATATGTTTGTCTCAATGCTTGAAGCATCTAGTCGCGCTCATCAATGGGAATATTTTGAATGTGTACAAGGAAATGTGTATATCTGGATACCAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_103042.p1 GENE.R_Transcript_103042~~R_Transcript_103042.p1 ORF type:complete len:601 (+),score=133.72,PPR_2|PF13041.2|7.7e+03,PPR_2|PF13041.2|4.9e+03,PPR_2|PF13041.2|0.21,PPR_2|PF13041.2|1.9e+03,PPR_2|PF13041.2|0.0038,PPR_2|PF13041.2|7.4e-05,PPR_2|PF13041.2|0.36,PPR_2|PF13041.2|8.1,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|0.076,PPR_2|PF13041.2|5e+03,PPR|PF01535.16|3.4e+03,PPR|PF01535.16|0.021,PPR|PF01535.16|16,PPR|PF01535.16|1.6,PPR|PF01535.16|1.5,PPR|PF01535.16|0.0069,PPR|PF01535.16|87,PPR|PF01535.16|29,PPR|PF01535.16|0.0064,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.044,PPR_3|PF13812.2|9.1e+02,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|23,PPR_3|PF13812.2|0.61,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|1.6e+03,PPR_1|PF12854.3|8.5e+03,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|46,PPR_1|PF12854.3|0.03,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|7.2e+02,PPR_1|PF12854.3|39 R_Transcript_103042:121-1923(+)
MDAPARPQALPNSPSVDPLTEKIKQRLVKKGVTPTPKIIHNLRKKELQKSLRKSRRLASQSPPEPLTSSQKKTLSEEFYFQTISKEYKDFTKALDTNSKGLNLVGKPWEPLELEKMRELVSGFEGKDAVVGGNLKSEHLRELGSLFQERKIESLSSFLDDDIELEEGMLEGDSVSGSPIRRRVSDAQAIRILVDRLSAREITMKDWKFTRMMKQSRLQFTEGQLLKIVGGLGDRGCWKQAMQVVDWVYSRKEQTHYKSRFVYTKLLAVLGKARRPQEALHVLKRMRGDCHIYPDMAAYHSIAVTLGQAGMVRELLRVIECMKEKPSRTIKNMHQKNWDPTLQPDIVVFNSVLNACVPSHQWKGVSWVFEQLRKGGLRANGATYGLAMEVMLHSEKYDLVHELFQKMKRSGESPKALTYKVLVRTFWKENKVEEAIRTVREMEQRGIIGSASVYYELACCLCNKGRWQEAMAEIEKLKRLRHSKPLVVAFTGMILSSMDGGHVNDCVSIFEHMQDHCAPNIGTVNAMLKVYSRNDMFLEAKDFFESVKRAMAGCGACLGNGNATLIPDVYMFVSMLEASSRAHQWEYFECVQGNVYIWIPA*

Click here to download the sequence:
Link to NCBI Protein BLAST